Gracilibacillus caseinilyticus: MUN88_17805
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Entry
MUN88_17805 CDS
T09432
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gcs
Gracilibacillus caseinilyticus
Brite
KEGG Orthology (KO) [BR:
gcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gcs03032
]
MUN88_17805 (topA)
03400 DNA repair and recombination proteins [BR:
gcs03400
]
MUN88_17805 (topA)
Enzymes [BR:
gcs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MUN88_17805 (topA)
DNA replication proteins [BR:
gcs03032
]
Prokaryotic type
DNA Topoisomerases
MUN88_17805 (topA)
DNA repair and recombination proteins [BR:
gcs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MUN88_17805 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
HypA
JHBP
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
UOQ47888
LinkDB
All DBs
Position
complement(3707719..3709797)
Genome browser
AA seq
692 aa
AA seq
DB search
MAQYLVIVESPAKAKTIERYLGKKYKVRASMGHVRDLPKSQMGVHEEDNFEPKYITIRGK
GPVLKELKTAAKKADQVFLAADPDREGEAIAWHLAHSLNIELDSKCRVVFNEITKDAVKE
SFKHPRTINMDLVDAQQARRILDRLVGYNISPLLWQKVKKGLSAGRVQSVAVKMIIDREN
EIKNFKPEEYWSIESNFKKGRQKFEGSFYGQGGKKQALHSREDVDAILQTIKGKDFLVEK
VNKRERKRNPSPSFTTSSLQQEAARKLNFRARKTMMVAQQLYEGIDLGKREGGITGLITY
MRTDSTRVSDTAKAQAKDFITSNYGKEFNGYSNKSKNAEGAQDAHEAIRPTNALRDPDSL
KTILSRDQFKLYKLIWERFIASQMAPAVMDTMTVHLTNQGVEFRANGSKVKFKGFMKVYT
ESSDDPNKQKDKWLPDLIEGETVNSDEMKPQQHFTQPPPRYTEARLVKTMEEEGIGRPST
YAPTLDTIQRRGYVALDSRRFVPTELGEMVNTIMEEFFPEIIDVAFTVKMEGDLDAIEEG
KTKWVNIIDQFYQGFKKRLETADEEMEKVEIRDEPAGIDCEKCGHEMVYKMGRYGKFLAC
SNFPDCRNTKPILKEIGVDCPKCKDGNIVERKSKKRRIFYGCDNYPDCDFLSWDKPVGRS
CPKCDQMLVEKRSKKKVQVQCSSCDYKEEEQG
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatatctagtaatcgttgaatcaccggcaaaagccaaaacaattgaaagatat
ctagggaaaaaatataaagtaagagcatctatgggccatgttcgtgacttacctaaaagt
caaatgggtgtacatgaagaagataactttgaaccaaaatatattacgattagagggaaa
ggtcccgtcttaaaagaattaaaaacagctgctaaaaaagcagatcaagtgtttctggca
gccgatccggatcgtgaaggggaagctattgcctggcatttagcccacagtttaaatatt
gaattggattctaaatgccgcgtagtgtttaatgaaataacaaaagatgcagtaaaagaa
tcatttaagcatcctagaaccattaacatggatttagtagatgcgcaacaggctagaaga
attttagatagattagttggttataatatcagtccgttattatggcaaaaagttaaaaaa
ggtctaagtgcaggacgtgtgcagtcagttgctgtgaaaatgattattgaccgcgaaaat
gaaattaaaaactttaagcctgaagagtattggagcatagagtctaactttaaaaaaggt
cgccaaaagttcgaaggaagcttttacggtcaaggtggtaaaaaacaagcactgcattcg
agggaagatgtggatgcgattttacagaccattaaaggtaaagattttcttgttgaaaaa
gtaaacaaaagagaaagaaaacgaaatccatctccttcttttactacttccagtttacaa
caggaagccgcgagaaagttaaatttcagagctcggaagacgatgatggttgctcagcaa
ttatatgaaggaattgacttaggtaaacgtgaaggtggcattaccggcttaattacctat
atgcgtacagattcgacgcgggtttcggatacggcgaaagcacaggctaaggattttatt
acgagtaactatgggaaggaatttaatggttacagcaacaagtctaaaaatgcagaaggt
gcacaggatgcccatgaggcaatccgtccaaccaatgctttacgtgatccggattcattg
aaaacaattctttcgagggatcaatttaagctttataaattaatctgggaacgatttatc
gccagccaaatggcacctgctgtaatggatacaatgactgtccatttaactaaccaggga
gtagagttcagagcgaatggttctaaagttaaatttaaagggttcatgaaggtatacacg
gagagctctgatgatcctaataaacaaaaagataaatggctgcctgatttaatagagggc
gaaacagttaattctgatgaaatgaagccgcaacagcatttcacacagccgcctcctcgc
tatacggaagcaagattggtcaaaacaatggaagaggaaggcattggtcgtccttcgact
tatgctccgacattggataccatacaacgtcgcggttatgtagcattggatagccgacgt
ttcgttccgacagaacttggtgaaatggtcaatacgattatggaagaattcttcccggaa
attatcgatgttgcattcactgtcaaaatggaaggcgatttggatgctatcgaagaagga
aaaacaaaatgggttaacatcatcgatcaattctatcaaggtttcaagaagcggctggaa
acagcggatgaagaaatggaaaaagttgaaattcgtgatgaaccagctggcattgattgc
gagaaatgtgggcatgagatggtttataaaatgggaagatacggaaagttccttgcttgc
tcgaacttcccggactgtcgtaacaccaagcctatcttaaaagaaatcggtgtggattgc
ccgaaatgtaaagatggaaacatcgtagagagaaaatcgaagaaaagaagaatcttctac
ggctgtgataactatccggattgtgatttcctctcctgggataagccagtaggcagaagt
tgtccaaaatgtgatcaaatgttagttgagaagagatcgaagaaaaaagtacaggttcaa
tgttcctcatgtgattataaagaggaagaacaaggctga
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