KEGG   Gracilibacillus caseinilyticus: MUN88_18455
Entry
MUN88_18455       CDS       T09432                                 
Symbol
rnjA
Name
(GenBank) ribonuclease J1
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
gcs  Gracilibacillus caseinilyticus
Pathway
gcs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gcs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MUN88_18455 (rnjA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gcs03019]
    MUN88_18455 (rnjA)
Messenger RNA biogenesis [BR:gcs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MUN88_18455 (rnjA)
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 DUF4453 Raco_middle
Other DBs
NCBI-ProteinID: UOQ48011
UniProt: A0ABY4F0Q0
LinkDB
Position
3841279..3842946
AA seq 555 aa
MKFVKNDQTAVFALGGLGEIGKNTYGVQFQDEIILIDAGIKFPEDELLGIDYVIPDYTYL
VQNQDKIKGLFITHGHEDHIGGIPYLLREINVPIYAGKLAMGLIRNKLDEHGLLRKAKLH
TYQEDDIFKFRKTAVSFFRTTHSIPDSYGIVVKTPPGNVVHTGDFKFDFTPVGEPANLSK
MAEIGKEGVLCLLSDSTNSEVPGFTLSERVVGDSINDIFSRVDGRLIFATFASNIHRLQQ
VVEAAVKHNRKIAVFGRSMEGAIKIGQELGYIRAPKNTFIEAHQLNQLPANEVTILCTGS
QGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTLSVSRIINQLYRAGAEVIHGPL
NDIHTSGHGGQQEQKLMLRLIKPKYFMPIHGEYRMLKEHTKLADSCDIPYKNSFIMDNGE
VLALGKDHAAIAGKIPSGSVYVDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMKEFQI
ASGPDIISRGFVYMRESEDLINEAQKLVSNHLNKVMERRTTQWSEIKNEITDTIAPFLYD
KTKRRPMILPIIMEV
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaaatttgtaaaaaatgatcaaactgcagtttttgcattaggtggtttaggtgaaatt
gggaaaaacacgtacggtgttcaatttcaggacgaaatcatcttaattgatgcaggtatt
aaattccctgaagacgagttattgggaattgattatgtgatacctgactacacttacctt
gtgcaaaatcaggacaagataaaaggattatttatcactcatggtcacgaagaccatatt
ggtggtattccttatttacttcgcgagataaatgtgcctatctatgcaggtaaattagca
atgggactaattcgtaataaattggatgaacacggtcttcttcgtaaggcgaaattacac
acttatcaagaagatgacatttttaaattcagaaaaacagctgtgtcgttctttagaaca
acacacagtattcccgattcctatggtattgttgtgaaaacccctcctggtaacgttgtg
cataccggagattttaaatttgattttacaccggtcggagaaccagccaatttatcaaaa
atggctgaaatcggtaaagaaggtgtactatgtctgttatcagatagtacgaacagtgaa
gttcccggatttacgttatctgaacgagtagttggtgacagtattaatgatattttctct
agagttgatggcagattaatatttgctactttcgcatccaatattcaccgcttgcagcaa
gtcgtggaagccgccgttaaacataaccgtaaaattgccgtattcggccgcagtatggaa
ggtgccataaaaattggacaagaacttggctacattcgtgctccaaagaatacatttatt
gaagcacaccaactcaatcagcttcctgctaacgaggtgaccatcctatgtactggttct
caaggggaaccaatggcggcattatcaagaattgctaatggtactcaccgccaaattcaa
attatacctggtgacacagttgtattctcttcttcaccaatccctgggaatacgctaagt
gtcagccgaattatcaatcaattgtatcgcgcaggtgcagaagtcattcacggaccatta
aatgatattcatacatctggtcacggcggacaacaagaacaaaaattaatgctacgttta
attaaaccgaagtattttatgccgattcacggggaatatcgtatgttaaaagaacatacg
aagcttgctgacagttgtgatatcccttataagaacagctttatcatggataatggtgaa
gtattagcgttaggtaaggatcacgctgcaattgcagggaaaatcccttctggttctgtc
tatgttgacggtagcggtattggtgatattggtaatatcgtattacgtgatcgacggatc
ctttctgaagaaggacttgtcatcgttgtcgtcagtatcaatatgaaagaattccaaatt
gcttccggtccggatattatttcacgaggtttcgtgtatatgagagaatctgaagactta
ataaacgaagcacaaaagcttgtttctaatcatttgaacaaagtaatggagcgtcgcaca
acgcaatggtctgaaatcaaaaacgaaattaccgataccatcgctccattcctgtacgac
aaaacaaaacgacgcccaatgatcttacctattatcatggaagtctaa

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