Geobacillus sp. C56-T3: GC56T3_0079
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Entry
GC56T3_0079 CDS
T01245
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
gct
Geobacillus sp. C56-T3
Brite
KEGG Orthology (KO) [BR:
gct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gct03400
]
GC56T3_0079
DNA repair and recombination proteins [BR:
gct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GC56T3_0079
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
Rad51
Lon_C
AAA_16
AAA_22
nSTAND3
RecA
GvpD_P-loop
AAA_24
AAA
MeaB
AAA_30
NTPase_1
SLFN-g3_helicase
AAA_14
DUF7125
Elong_Iki1
ArsA_ATPase
ABC_tran
NPHP3_N
MCM
NACHT
ATPase_2
AAA_5
IstB_IS21
AAA_19
DAP3
DUF7129
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
ADI25153
LinkDB
All DBs
Position
102014..103387
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AA seq
457 aa
AA seq
DB search
MAKKKTKFVCQECGYESAKWLGRCPGCQTWNSLVEEIEQEKPTVRGAFLHSERAGSAKPV
PITAVEAVQEPRMKTNSAELDRVLGGGIVKGSLVLIGGDPGIGKSTLLLQTSAQLAAAGH
QVLYVSGEESVKQVKLRAGRLRAECDRLYVLAEADLEYIVAAVETVQPACVIIDSIQTVY
RTDISSAPGSVAQVRECTAELMKLAKTKGIAIFIVGHVTKEGAIAGPRLLEHMVDTVLYF
EGERHHTYRILRAVKNRFGSTNEIGIFEMRDIGLKEVENPSEVFLEERSRGAAGSTVVAA
MEGTRPVLVEIQALVSPTSFGNPRRMATGLDHNRVSLLMAVLEKRVGLLLQNQDAYLKVA
GGVKLDEPAIDLAVAVSIASSFRDRPTNPADVIIGEVGLTGEVRRVSRIEQRVQEAVKLG
FSRIIVPKNNLAGWQPPKGVQVIGVSHVAEALEHTMC
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaagaaaacgaagttcgtttgccaagagtgtggatatgagtcggccaaatgg
cttggacgctgtccgggatgccaaacatggaattcgcttgttgaggaaattgagcaggag
aaaccgactgtgcgcggcgcatttcttcattcggagcgggcgggttcggccaaaccggtc
ccgattacagccgtggaggcggtgcaagagccgcgcatgaaaacgaacagcgcggagctc
gatcgcgtgttgggcggtggaatcgtcaaaggttcgctcgttttgatcggcggcgaccct
ggcattggcaaatcaacgttgcttttgcaaacatcggcgcagctggccgccgctgggcat
caagtgctgtatgtctccggtgaggaatcggtcaaacaagtaaagctgcgcgctggacgc
cttcgtgcggagtgcgatcggctgtacgtgttggcggaagcagatttggaatacattgtg
gcagcggttgaaacggttcaacctgcttgtgtcatcattgattcgattcagacggtgtat
cgcaccgatatttcctctgcaccgggcagcgtcgcccaagtgcgcgaatgcacggccgag
ctgatgaagctggcgaaaacaaaaggcattgccatttttatcgtcggtcatgtgacgaag
gaaggggcgatcgccgggccgcgcctgctcgaacatatggtggacaccgttctctatttt
gaaggggagcgacaccatacgtatcgcattttgcgagcggtgaaaaaccgttttggctca
acgaacgaaatcggcatttttgagatgcgcgacattgggctgaaggaagtggaaaaccca
tcagaagtgtttttagaagaacggtcgcgcggagcggctggctcgacggtcgtggcggcg
atggaagggacgcggccggtgctcgtggaaatccaggcgctcgtctcgccgacgagcttc
ggcaacccgagacggatggcaaccggccttgaccataaccgtgtgtcgcttttgatggcc
gtgctcgaaaagcgggttgggctgctgttgcaaaaccaagatgcttatttgaaagtggcg
ggcggcgtgaagcttgatgagccggcaattgacttggcggtcgctgtcagcatcgcctcg
agctttcgcgatcggccgacgaatccggcggatgtcattatcggcgaagtcggcttaact
ggagaggtgcgccgcgtctcgcgcatcgaacagcgcgtgcaggaggcggtaaaattaggc
ttttcccgcatcattgtgccaaaaaacaatttagctggctggcagccgccaaaaggtgtg
caagtgatcggtgtttcgcatgtggccgaggcgcttgagcatacaatgtgttaa
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