Geobacillus sp. C56-T3: GC56T3_0664
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Entry
GC56T3_0664 CDS
T01245
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
gct
Geobacillus sp. C56-T3
Brite
KEGG Orthology (KO) [BR:
gct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gct03016
]
GC56T3_0664
Enzymes [BR:
gct01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
GC56T3_0664
Transfer RNA biogenesis [BR:
gct03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
GC56T3_0664
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
DUF2576
Motif
Other DBs
NCBI-ProteinID:
ADI25711
LinkDB
All DBs
Position
712254..712832
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AA seq
192 aa
AA seq
DB search
MKRSHYFIAVPLTSEAKQAIARFSGDAASSLPFRTWVHEEDYHITLAFLGDVPPKKMAPL
CEAMAAVAAKSAPFSLALAGLGTFGERTAPRVFWQGVETEEALNGLRRDVYEACMKLGFS
LDRRPFAPHITIARKWQGAEPFRPDRLRSLAAAKAVFSVPEIVLYRTNMERTPKYEAIAV
FPLLGAPMNGRK
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacgaagccattattttatcgctgttccgctgacgtctgaagcgaaacaagccatt
gcccgattttcgggggatgcggcgtcgtcgctgccgtttcgcacatgggtgcatgaagag
gactatcatatcaccctcgcgtttttaggcgatgtgccgccgaaaaaaatggcgccgctg
tgcgaagcgatggccgccgtcgccgccaaaagcgccccgttttccctcgcgcttgccggg
cttgggacgttcggagagcggacggcgcctcgcgttttttggcaaggagtcgaaacggaa
gaagcgttgaatggattgcggcgcgacgtgtatgaagcgtgcatgaagcttgggttttcc
ttggaccggcggccgtttgccccgcatattacgatcgcccgcaaatggcagggagccgaa
ccgtttcgcccggatcgcctccgttcgcttgccgcggccaaggcggtgttttcggtgcct
gagatcgtgctgtatcggacgaatatggaacggacgccgaagtacgaagcgatcgccgtg
ttcccgttgcttggcgcgccgatgaatggccggaaatag
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