KEGG   Geobacillus sp. C56-T3: GC56T3_0763
Entry
GC56T3_0763       CDS       T01245                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
gct  Geobacillus sp. C56-T3
Pathway
gct03030  DNA replication
gct03410  Base excision repair
gct03420  Nucleotide excision repair
gct03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gct00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GC56T3_0763
   03410 Base excision repair
    GC56T3_0763
   03420 Nucleotide excision repair
    GC56T3_0763
   03440 Homologous recombination
    GC56T3_0763
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gct03032]
    GC56T3_0763
   03400 DNA repair and recombination proteins [BR:gct03400]
    GC56T3_0763
Enzymes [BR:gct01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GC56T3_0763
DNA replication proteins [BR:gct03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     GC56T3_0763
DNA repair and recombination proteins [BR:gct03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     GC56T3_0763
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GC56T3_0763
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_polI_exo1 5_3_exonuc HHH_5 Enkurin HHH_2 XPG_I
Other DBs
NCBI-ProteinID: ADI25808
LinkDB
Position
816705..819335
AA seq 876 aa
MKKKLVLIDGSSVAYRAFFALPLLHNDKGIHTNAVYGFTMMLNKILAEEEPTHMLVAFDA
GKTTFRHEAFQEYKGGRQQTPPELSEQFPLLRELLRAYRIPAYELENYEADDIIGTLAAR
AEQEGFEVKVISGDRDLTQLASPHVTVDITKKGITDIEPYTPETVREKYGLTPEQIVDLK
GLMGDKSDNIPGVPGIGEKTAVKLLRQFGTVENVLASIDEIKGEKLKETLRQHREMALLS
KKLAAIRRDAPVELSLDDIAYQGEDREKVVALFKELGFQSFLEKMESPSSEEEKPLAKMA
FTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFVAW
LGDETKKKSMFDSKRAAVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYE
AVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWALERPFLDELRRNEQDRLLVELEQP
LSSILAEMEFAGVKVDTKRLEQMGEELAEQLRTVEQRIYELAGQEFNINSPKQLGVILFE
KLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTK
KVHTIFNQALTQTGRLSSTEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELR
VLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISDYG
LAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRN
FNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQARLLLQVHDELILEAPKEE
MERLCRLVPEVMEQAVTLRVPLKVDYHYGSTWYDAK
NT seq 2631 nt   +upstreamnt  +downstreamnt
ttgaaaaaaaagcttgttttaatcgacggcagcagcgtggcgtaccgcgccttttttgcc
ttgccgcttttgcataacgacaaaggcatccatacgaacgccgtctacgggtttacgatg
atgttgaataaaattttggcggaagaagagccaactcatatgcttgtcgcgtttgacgcc
gggaaaacgacgttccggcatgaagcgtttcaagagtataaaggtgggcgccagcagacg
ccaccggagctgtcggagcagtttccgctgttgcgcgagctgctgagggcgtatcgcatc
cccgcctatgaactcgagaactacgaagcggacgatattatcggaacgcttgccgcccgc
gctgagcaggaagggtttgaggtgaaagtcatttccggcgaccgcgatctgacccagctc
gcctccccccatgtgacggtggacattacgaaaaaagggattaccgatatcgaaccatac
acgccggagacggtccgcgaaaaatacggcttaactccggaacaaatcgttgatttgaaa
ggattgatgggcgacaaatcggacaacatccccggagtgccgggcatcggggaaaagacg
gcggtcaagctgctcaggcaattcggcacggtcgaaaacgtgcttgcctccattgacgag
atcaaaggcgaaaagttgaaagaaacgctgcgccaacaccgggagatggcgctgttaagc
aaaaagctcgccgccattcgccgcgacgccccggtcgagctctcgcttgatgacatcgcc
tatcaaggggaagaccgggagaaagtggtcgctttatttaaagagcttgggtttcaatcg
tttttagagaaaatggaatcgccgtcatcagaagaggaaaaaccgcttgccaagatggca
tttacgcttgctgaccgcgtgacggaggagatgcttgccgacaaggcggcgcttgtcgtt
gaagtggtcgaggaaaattatcatgatgcgccgatcgtcggcatcgctgtggtcaacgaa
catggacggtttttcctgcgcccggagacggcgcttgccgatccgcagtttgtcgcctgg
cttggtgatgaaacgaagaaaaaaagcatgtttgactcaaagcgcgcggcagtcgccttg
aaatggaaaggaattgagctatgcggcgtttcctttgatttattgctggccgcctatttg
cttgatccggcgcaaggtgttgatgatgtagctgccgcagcaaaaatgaagcaatacgaa
gcggtgcgcccggatgaagcggtgtatggcaaaggggcgaagcgggccgtgccggatgag
ccagtgctcgccgagcatctcgtccgcaaggcggcggcgatttgggcgctcgaacggccg
tttttggatgagctgcgccgcaacgaacaagatcggttgctcgtcgagctcgagcagccg
ttgtcttcgattttggcggaaatggaatttgccggagtgaaagtggatacgaagcggctc
gaacagatgggcgaagagctcgccgagcagctgcgcacggtcgagcagcgcatttatgag
ctcgccggccaagaattcaacatcaattcaccgaaacagctcggcgtcattttatttgaa
aaactgcagctgcccgtcttgaaaaaaacgaaaaccggctactccacttcggcggatgtg
cttgaaaaacttgcgccttatcacgagatcgtggaaaacattttgcattaccgccagctt
ggcaagttgcagtcgacgtatattgaaggattgctgaaagtcgtgcgacccgatacaaag
aaggtgcatacgattttcaatcaggcgttgacgcaaaccggacggctcagctcgacggag
ccgaacttgcaaaacattccgattcggcttgaggaaggacggaaaatccgccaagcgttc
gtgccgtcggagtctgattggctcattttcgccgccgactactcacaaattgagttgcgc
gtcctcgcccatattgcggaagatgacaatttaatggaagcgttccgccgcgatttggat
atccatacgaaaacagcgatggacattttccaagtgagcgaggacgaagtgacgcccaac
atgcgccgtcaggcgaaggcggtcaactttgggatcgtttacgggatcagtgattacggc
ttggcgcaaaacttaaatatttcgcgcaaagaggcggctgaattcatcgagcgctacttc
gaaagcttccctggcgtgaagcggtatatggaaaacattgtgcaagaagcaaaacagaaa
gggtatgtgacgacgctgctgcatcggcgccgctatttgccggatatcacgagccgcaac
ttcaacgtccgcagttttgctgaacggatggcgatgaacacgccgattcaagggagcgcc
gctgacattattaaaaaggcgatgatcgatctgaacgccagactgaaggaagagcggctg
caagcgcgccttttgctgcaggtgcatgacgagctcattttggaggcgccgaaagaagag
atggagcggctgtgccggctcgttccggaagtgatggagcaagcggtcacacttcgcgtg
ccgctcaaagtcgattaccattatggctcgacgtggtatgacgcgaaataa

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