Geobacillus sp. C56-T3: GC56T3_1008
Help
Entry
GC56T3_1008 CDS
T01245
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
gct
Geobacillus sp. C56-T3
Pathway
gct02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gct00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GC56T3_1008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gct03021
]
GC56T3_1008
Transcription machinery [BR:
gct03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GC56T3_1008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
HTH_20
DUF2408
DUF2316
Motif
Other DBs
NCBI-ProteinID:
ADI26050
LinkDB
All DBs
Position
1067699..1068826
Genome browser
AA seq
375 aa
AA seq
DB search
MAEKPAQSKQAEAAGESLEQVKEQLAELGKKRGILTYEEIAERLSGFDLDSDQMDEYYEY
LAEQGIEVISESDLEADPDIDDLAKEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVPLLS
AEEEIELAKRIEQGDEEAKRRLTEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVE
KFDYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRE
PTPEEIAEEMDLTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPSEHAAY
ELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRK
LRHPSRSKRLKDFLE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaaccagcccaatcaaagcaggctgaagctgccggcgaatcgcttgaacaa
gtgaaagagcaactcgctgagctcggcaaaaagcgggggatcctcacctacgaggaaatc
gctgagcggttgtctggctttgatttggactccgaccagatggatgagtattatgaatac
ctcgctgagcagggcattgaagtgatcagcgaatccgaccttgaggccgatccggacatc
gacgacttggccaaagaggaagaattcgacttaaatgacttgtccgttcctcccggcgtc
aaaatcaatgacccggtgcgcatgtacttgaaggagatcggccgcgtgccgctgttgtcg
gcggaagaagaaatcgagctggcgaaacggatcgagcaaggcgatgaagaagcgaaacgc
cggctgacggaagcgaacctccgcctcgtcgtcagcatcgccaaacggtatgtcggccgc
ggcatgctctttcttgatttgattcaagaagggaacatggggctgatcaaggcggtcgaa
aagtttgactatcggaaaggctacaagttcagcacgtacgcgacgtggtggatccgccaa
gccatcacaagggcgatcgccgatcaggcgcggacgatccgcatcccggttcatatggtc
gaaacgatcaataaactgatccgcgtccaacggcaattgcttcaagacctcgggcgcgaa
ccaacgccggaagaaatcgccgaggaaatggatttgacaccggaaaaagtgcgggaaatt
ttgaaaatcgcccaagaaccggtgtcgctcgagacgccgatcggcgaggaagatgactcg
catcttggcgatttcatcgaagaccaagacgcgacatcgccatccgagcacgctgcttac
gagctgttgaaagagcagctcgaagatgtgcttgatacgctgacggatcgcgaggaaaat
gtgctgcgtctccgcttcgggcttgacgacggacggacgcggacgctcgaagaagtcggc
aaagtgttcggcgtgacgcgcgaacgcatccgtcaaattgaagccaaagcgttgcgcaag
ctgcgccatccaagccgcagcaaacggctgaaagactttttagagtga
DBGET
integrated database retrieval system
