Geobacillus sp. C56-T3: GC56T3_1015
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Entry
GC56T3_1015 CDS
T01245
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
gct
Geobacillus sp. C56-T3
Brite
KEGG Orthology (KO) [BR:
gct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gct03019
]
GC56T3_1015
03009 Ribosome biogenesis [BR:
gct03009
]
GC56T3_1015
Enzymes [BR:
gct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GC56T3_1015
Messenger RNA biogenesis [BR:
gct03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GC56T3_1015
Ribosome biogenesis [BR:
gct03009
]
Prokaryotic type
rRNA helicases
GC56T3_1015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ADI26057
LinkDB
All DBs
Position
1073936..1075246
Genome browser
AA seq
436 aa
AA seq
DB search
MAETQFTRFPFQPFIIEAIKTLRFYKPTEIQERIIPGALRGESMVGQSQTGTGKTHAYLL
PIIEKIKPERAEVQAVITAPTRELATQIYHETLKITKFCPKDRMIVARCLIGGTDKQKAL
EKLNVQPHIVIGTPGRINDFIREQALDVHTAHILVVDEADLMLDMGFITDVDQIAARMPK
DLQMLVFSATIPEKLKPFLKKYMENPTFVHVNPKQTANENIEHVLIPLRGREKTKLLRDV
LLSYNPYLAIVFVNTRKMADEVADRLAEQGLKVGVLHGDLTPRERRKMMNLIRDLEFQYV
VATDLAARGIDIEGVSHVINYELPDDLQFYIHRAGRTARAGYSGIAATIYEPSDQDAIAR
LEKMGISFVHRDLVRGEWKELPPWNRRSKRAGEKDDELALLFAKLKKTKQVKPGYKKKLR
AELEKKKKRLGRFKKS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaacgcagtttactcgttttccgtttcaaccgtttatcatcgaagcgatcaag
acgcttcgtttttataaaccgacggaaattcaagagcgcatcattccgggggcgctgcgc
ggcgaaagcatggtcggccaatcgcaaaccggaacgggaaaaacacatgcgtacttattg
ccgatcattgaaaaaatcaagccggaacgcgccgaagtgcaagccgtcatcacggcgccg
acgcgcgaattagcgacgcaaatttaccacgaaacgctgaaaatcacgaagttttgcccg
aaagatcggatgatcgtcgcccgttgcttgatcggcgggacggataagcaaaaagcgctc
gaaaagctcaacgtgcagccgcatattgtcatcggcacgccggggcgcatcaacgatttt
atccgcgaacaggcgcttgatgtgcatacggcccacatccttgtcgtcgatgaagccgac
ttgatgctcgatatgggctttatcacggatgtcgaccaaatcgccgcccggatgccgaaa
gacttgcaaatgctcgtcttttcagcgacgattccggaaaagctgaagccgtttttgaaa
aaatatatggaaaacccgacctttgtccacgtcaacccgaaacagacggcgaacgaaaac
atcgaacatgtgctcatcccgctgcgcggacgcgagaaaacaaaacttctccgtgatgtg
ctcctcagctacaacccgtatttggccatcgtatttgtcaacacaaggaaaatggctgac
gaggtcgccgaccgtctcgctgagcaaggattgaaagtcggcgtgctgcacggcgatttg
acgccgcgcgagcggagaaagatgatgaatctcatccgcgatttggagtttcaatatgtc
gtcgcgaccgatttggcggcgcgcggcatcgatattgaaggcgtcagtcatgtcatcaac
tacgagttgcctgatgatctgcagttttatattcaccgcgccggacggacggcgcgcgct
ggctatagcggcattgcggcgacgatttacgagccgtctgaccaagatgcgattgcccga
ttggaaaaaatgggaatttcgtttgtccaccgtgatctcgtgcgcggcgaatggaaggag
ctgccgccgtggaaccggcggagcaagcgggcgggcgaaaaggatgacgaactggcgctg
cttttcgccaaactgaaaaaaacgaagcaggtgaagccgggctacaaaaaaaagctgcgc
gcggagctggagaagaagaaaaagcggcttggccgcttcaaaaaatcataa
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