Geobacillus sp. C56-T3: GC56T3_1170
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Entry
GC56T3_1170 CDS
T01245
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
gct
Geobacillus sp. C56-T3
Brite
KEGG Orthology (KO) [BR:
gct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gct03016
]
GC56T3_1170
Enzymes [BR:
gct01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
GC56T3_1170
Transfer RNA biogenesis [BR:
gct03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
GC56T3_1170
Prokaryotic type
GC56T3_1170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
ADI26197
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All DBs
Position
1236140..1237063
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AA seq
307 aa
AA seq
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MELLFLGTGAGVPAKERNVSSVALQLLDERGATWLFDCGEATQHQILHTAIRPRRIEHIF
ITHLHGDHLFGLPGLLGSRSFQSGETPLTVFGPKGIRAFVETALAVSGTKLRYELNIVEI
DEGVIFDDERFSVIAKRLDHGMPSYGFRVVEKDLPGPLLVERLQALGVRPGPIYQEIKQG
KTVVLDDGTVIDGREFVGPPQKGRIVAVLGDTRFCEAAIELARDADVVVHEATFAAAEQR
LARDYFHSTTTDAAEVARRAGAKRLILTHISSRYQGAAALQLVAEARSVFPNTELAVDFA
SFSIPRG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ttggaactgttgtttttaggcacgggtgccggcgtgccggccaaagagcgcaacgtatcg
tccgtcgccctgcagctgcttgacgagcggggggcgacatggctgtttgactgcggcgaa
gcgacgcagcatcaaattttgcataccgccattcgcccgcgccgcatcgagcatattttt
attacgcacttgcatggcgatcatctgttcggtctacctgggctgcttggcagtcgctcg
ttccaaagcggcgagacgccgcttacggtcttcggtccaaaaggcattcgcgcgtttgtc
gaaacggcccttgccgtcagcgggacaaagctccggtatgaactgaacattgtggagatc
gatgagggcgtcatttttgacgatgaacggttttccgtcatcgccaaacggctcgatcac
ggcatgccgtcatacggtttccgcgtcgttgaaaaagatttgcccggcccgctcttggtc
gagcgattgcaagcactcggcgtccgccccggcccgatttatcaagaaattaagcaagga
aaaacggtcgtgctggatgacggcacggtcatcgacgggcgcgaatttgtcgggccgccg
caaaaggggagaatcgtcgccgtgttgggcgacacccgtttttgcgaagcggcgattgaa
ctcgcccgcgatgccgatgtcgtcgtccacgaggcgacgtttgccgcggcggaacagcgg
ctggcccgtgactatttccattccacgaccacagacgcagccgaggtggcgaggcgggcc
ggggcgaagcggcttattttgacccatatcagctctcgctaccaaggtgcggcggcgctg
cagctcgtcgccgaggcgcgcagcgtgtttccgaacaccgagctcgccgttgatttcgcc
tcgttttcgatcccgcgcggttaa
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