Geobacillus sp. C56-T3: GC56T3_2091
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Entry
GC56T3_2091 CDS
T01245
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gct
Geobacillus sp. C56-T3
Pathway
gct03030
DNA replication
gct03430
Mismatch repair
gct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GC56T3_2091
03430 Mismatch repair
GC56T3_2091
03440 Homologous recombination
GC56T3_2091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gct03032
]
GC56T3_2091
03400 DNA repair and recombination proteins [BR:
gct03400
]
GC56T3_2091
Enzymes [BR:
gct01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GC56T3_2091
DNA replication proteins [BR:
gct03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GC56T3_2091
DNA repair and recombination proteins [BR:
gct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GC56T3_2091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ADI27072
LinkDB
All DBs
Position
complement(2195564..2196292)
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AA seq
242 aa
AA seq
DB search
MHERHRFWQRALRLLSLGVPREASSALFGHDHSLQQETWLRSLQKEKQHIIDWHDRLTDI
PFVIIDMETTGFSPEQGDEILAMAAAKTVGGVVTDAYMTLVKPEKPIPEHISALTGIEAK
DVVFAPPLAEALRTFVPFIAAGVLIGYHIGHDLAFLRHALWRHYRQKWSGRFVDLQPMMT
LIGHSCPTFDDALACYGICCPRRHTADGDVEAMAKLWAILLDEFRQRGIDTLHDLYAALS
RC
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcatgagcggcaccgtttttggcagcgggcgctccgcttgttgtcgctcggcgttccg
cgcgaggcatcatccgccttatttgggcatgaccattcgctgcaacaggaaacatggctt
cgctcgctgcaaaaggaaaaacagcacatcatcgattggcatgaccgtttgactgacatc
ccgtttgtcatcatcgatatggaaacgaccggcttttccccggagcaaggcgatgaaatt
ttggccatggcggcagcgaaaacggttggaggagtcgtgaccgatgcgtacatgacgctc
gtcaagccggaaaagccgattccggaacatatttccgccttgaccgggattgaggcgaag
gatgtggtgttcgctccgccgcttgccgaggcgctgcgcacgtttgtgccgtttattgcc
gccggcgtcttaattggctatcatatcggtcatgatttggcgtttttgcgccatgccctt
tggcgtcattatcggcaaaaatggagcggacgttttgtcgacttgcagccgatgatgacg
ctgatcggccattcgtgcccgacgtttgacgatgcgttagcttgttatggcatctgttgc
ccgcgccgccatacggcggatggcgacgtcgaagcgatggcgaagctatgggcgatcttg
ctcgatgaattccgccagcgcggcatcgacacgctgcatgatctgtacgccgcgctcagc
cggtgttga
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