Geobacillus sp. C56-T3: GC56T3_2342
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Entry
GC56T3_2342 CDS
T01245
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gct
Geobacillus sp. C56-T3
Brite
KEGG Orthology (KO) [BR:
gct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gct03032
]
GC56T3_2342
03400 DNA repair and recombination proteins [BR:
gct03400
]
GC56T3_2342
Enzymes [BR:
gct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GC56T3_2342
DNA replication proteins [BR:
gct03032
]
Prokaryotic type
DNA Topoisomerases
GC56T3_2342
DNA repair and recombination proteins [BR:
gct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GC56T3_2342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ADI27312
LinkDB
All DBs
Position
complement(2468976..2471051)
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPTKAKTIERYLGKKYTVKASMGHVRDLPKSQMGVDIDHGYEPKYITIRGK
GQVIKELKTAAKKAKKVFLAADPDREGEAIAWHLAHMLDLDIHSECRVVFHEITKDAIQQ
SFQKPRAINMNLVDAQQARRVLDRLVGYNISPLLWKKVKKGLSAGRVQSVALRLIIDRER
EIREFQPEEYWTIQATFQKEGETFAASFYSIDGQKRDLKTEADVKAVLDRLNGTAFVVKT
VTKRERKRSPVPPFTTSSLQQEAARKLNFRTKKTMMIAQQLYEGIDLGSEGTVGLITYMR
TDSTRVAETAQQEAAAYIEATFGAMYVNQEKRKEKKSTNAQDAHEAIRPTSAFRDPDKVK
PYLTRDQFRLYKLIWERFIASQMAAAVLDTMSVELENNGVVFRASGSKVKFPGFMKVYIE
GTDDQTEEQDRILPDLEEEETVESETIESKQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRNYVVLENKRFVPTELGEIVVELMLEFFPEIIDVEFTAKMEKELDEIEEGK
VEWIKVVDEFYREFEKRLKVAEKEMRAVEIKDEPAGIDCEVCGSPMVYKMGRFGKFIACS
NFPECRHTKPIVKEIGVKCPKCREGNIVERSTKRKRVFYGCDRFPDCDFVSWDKPLARPC
PKCAGLLVEKELKKGVQVQCTACDYEERLEA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactacttagttatcgtcgaatcgccaacgaaagcgaagacgatcgaacgatac
ttgggaaaaaaatatacagtcaaagcgtcgatgggccacgtccgcgatttgccaaaaagc
caaatgggcgttgatatagaccatggctacgagccgaaatacattacgatccgcggcaaa
ggccaggtgatcaaagagttgaaaacggcggcgaaaaaagcgaaaaaagtgtttcttgcc
gccgaccccgatcgcgaaggagaggcgattgcctggcatttggcccacatgctcgatctg
gacattcactctgaatgccgcgttgtctttcatgagatcacgaaggatgctattcagcaa
tcgtttcaaaagccgcgcgcgatcaatatgaatcttgttgacgcccagcaggcgcggcgc
gtgctcgaccgcctcgtcggctataacatcagcccgctcttatggaaaaaggtgaaaaaa
ggattaagcgccggccgcgtccaatcggtggcgctgcgcctcatcatcgatcgggaacga
gaaattcgcgaatttcagccggaagaatattggacgattcaagcgacgtttcaaaaagaa
ggagagacgtttgccgcctcgttttacagtattgacggacaaaagcgcgatttaaagacg
gaggcggatgtgaaagccgtgctggaccgcttaaacggaacggcatttgtggtgaaaacg
gtgacaaaacgagagcgcaagcgcagccccgtgccgccgtttacgacgtcgtcgcttcag
caggaagcggcgcgcaaactgaatttccggacgaaaaagacgatgatgatcgcccagcag
ctgtacgaaggaatcgatcttggcagcgaagggacggtcggtttgatcacgtatatgcgc
accgattcaacgcgcgtcgccgagacggcgcagcaagaggcggcggcatatatcgaggcg
acgttcggcgctatgtatgtcaaccaggaaaagcggaaagagaagaaaagcacgaacgcc
caagacgcccatgaagcgatccgcccgacatcggcatttcgcgatccggacaaagtgaaa
ccgtatttgacgcgcgaccagtttcggttgtataaactcatttgggaacggttcatcgcc
agtcaaatggcggccgccgtgcttgacaccatgagcgtcgagttggaaaacaacggtgtc
gtgttccgcgccagcggctcgaaggtgaaatttccagggtttatgaaagtgtatattgaa
ggaacggacgatcaaacggaagagcaggaccgtatcctcccggatttggaagaagaggaa
acggttgagagcgaaacgatcgaatcgaagcagcactttactcagccgccgccgcgctac
acggaagcccgcctcgtcaaaacgttggaggaactcggcatcggccgcccgtcgacgtat
gccccgacgcttgatacgatccaaaaacgcaactatgtcgtccttgagaacaagcggttt
gtcccgaccgagctcggcgaaatcgttgtagagctgatgctcgaatttttcccggaaatt
atcgatgtcgagtttacggcgaaaatggaaaaagaattggacgaaattgaagaagggaaa
gtggaatggatcaaagtcgtcgacgagttttaccgcgaatttgaaaaacggttgaaagtg
gcggaaaaagaaatgcgcgcagttgagattaaggatgagccggccggcattgactgcgag
gtgtgcggcagtccgatggtgtacaaaatgggccgtttcggcaagtttatcgcctgctcg
aattttccggaatgccgccatacgaagccgattgtcaaagaaatcggcgtcaagtgcccg
aaatgccgcgagggcaacatcgtcgagcgcagcacgaaaagaaagcgggtgttttacggc
tgcgaccgtttcccggattgcgacttcgtctcgtgggataaaccgctcgcccgcccgtgt
ccgaaatgcgcggggctgcttgtggagaaagagctgaaaaaaggtgtgcaagtgcaatgc
acggcgtgcgactatgaagagcggctagaagcctga
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