Geobacillus sp. C56-T3: GC56T3_2542
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Entry
GC56T3_2542 CDS
T01245
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gct
Geobacillus sp. C56-T3
Pathway
gct00061
Fatty acid biosynthesis
gct00071
Fatty acid degradation
gct01100
Metabolic pathways
gct01212
Fatty acid metabolism
gct02024
Quorum sensing
gct04146
Peroxisome
Module
gct_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gct00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GC56T3_2542
00071 Fatty acid degradation
GC56T3_2542
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GC56T3_2542
09145 Cellular community - prokaryotes
02024 Quorum sensing
GC56T3_2542
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gct01004
]
GC56T3_2542
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gct04147
]
GC56T3_2542
Enzymes [BR:
gct01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GC56T3_2542
Lipid biosynthesis proteins [BR:
gct01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GC56T3_2542
Exosome [BR:
gct04147
]
Exosomal proteins
Exosomal proteins of breast milk
GC56T3_2542
Exosomal proteins of breast cancer cells
GC56T3_2542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ADI27500
LinkDB
All DBs
Position
complement(2684013..2685632)
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AA seq
539 aa
AA seq
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MSEKRALSLYPEHISFYMDIPDKTVCDVLHERAAEFGAQPALTFYDQTITYAELAAAVNR
FTSSLQALGVQKGDRVAIMLPNCPQYVIAYYGILQAGAIVTQVNPMLVERELSYLLNDSG
AEMIVIYEPLYPRLAAVRGETAVKQAITVSFGAPPSVALAEGDVTFDEFLAAGSGAVRPV
PIEPTHDVAVLQYTGGTTGRSKGAMLTHRNIFANVLQCAEFFKGTFEFGKERYLTVIPLF
HVFAMTSGMNLAIYQGAENILLPRFELKEVLETIRDKQPTVFPGVPTMYVAITNTPGVEQ
YGINSIKTCNSGSAPMPLELMRDFEAKTGAVVLEGYGLSEASPVTHCNPPFAARKPGTVG
IGMPLTEYKVVDVATGTQELPPGEVGELIIRGPQVMKGYWNMPEETAAVLRDGWLYTGDL
ASIDEEGYVTIVDRKKDLIIAGGYNIYPREIEEVLYEHPAVKEAAAVGVPDPYRGETVKA
IIVLKDGMQASEEEILAHCRKNLAAYKVPRIVEFRAELPKTNVGKILRRALREEASRSQ
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaaacgggcgttgtctctttatccggaacacatttcgttctatatggatatt
cccgacaaaacggtatgcgatgtactgcatgaacgggcggcggaatttggcgctcagccg
gcgctgacgttttatgaccaaacgatcacctatgccgagctcgctgcagcagtcaaccgt
ttcacctcgagcctgcaggcgcttggggtgcaaaaaggggatcgggtcgcgattatgctg
ccgaactgtccgcaatatgtcatcgcttactatggcattttgcaggcgggcgccatcgtc
acccaagtgaatccgatgcttgtcgaacgtgaactctcgtatttgctgaacgattccgga
gcggagatgatcgtcatttatgaaccgctttatccgcgccttgccgcggtcagaggggag
acagccgtcaaacaagcgatcaccgtcagcttcggagcgccgccatccgttgcgctggct
gaaggagatgtcacatttgacgaatttcttgccgcaggaagcggagctgtgcgcccggtg
ccgatcgaaccaacgcatgacgtcgctgtgctgcaatatactggcgggacgacagggcgc
tcaaaaggagcgatgctcacccaccgcaacattttcgccaacgtcttgcaatgcgccgaa
tttttcaaagggacatttgagttcgggaaagagcgatatttaactgtcatcccgttgttc
cacgtgttcgcgatgacgtcgggaatgaacttggccatttaccaaggagcggaaaacatt
ttgctgccgcgctttgagctgaaagaagtgttggagacgattcgcgataaacagccaacg
gtgtttccgggcgtgccgaccatgtatgtcgccattacaaacacacctggagtcgagcaa
tacggcatcaacagcatcaaaacgtgcaacagcggcagcgcgccgatgccgcttgagttg
atgcgcgacttcgaagcgaaaacgggagcggttgtccttgaaggatacggcttgtccgaa
gcctcgccagtgacgcattgcaatccgccgtttgcggcgcgcaagccgggcacggtcggc
atcggcatgccgctgaccgagtacaaagtcgtcgatgtggcgactggcacgcaagagttg
ccgccaggcgaagtcggcgagctgattatccgtggaccgcaagtgatgaaaggctattgg
aacatgccggaagaaacggcggcggtgctgcgcgacggctggctgtacactggcgatttg
gcttcgattgacgaggaagggtatgtgacgattgtcgaccggaaaaaagatctgatcatc
gccggcggctataacatttatccgcgtgaaatcgaagaagtgctgtacgaacatccagcg
gtgaaagaggcggcggcagttggtgtgcctgatccgtatcgcggcgaaacggtgaaggcg
attatcgttttaaaagatggaatgcaggcaagcgaagaagaaattcttgcccattgccga
aaaaacttagcggcgtacaaagtgccgcgcattgtcgagttccgtgccgaactgccgaag
acgaacgtcgggaaaattttgcgccgcgccttgcgtgaagaagcatcccgctcgcaataa
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