Geobacillus sp. C56-T3: GC56T3_2877
Help
Entry
GC56T3_2877 CDS
T01245
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
gct
Geobacillus sp. C56-T3
Brite
KEGG Orthology (KO) [BR:
gct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gct03400
]
GC56T3_2877
DNA repair and recombination proteins [BR:
gct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GC56T3_2877
Archaeal homologous recombinant proteins
GC56T3_2877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
SMC_N
AAA_29
AAA_21
ABC_tran
MMR_HSR1
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ADI27819
LinkDB
All DBs
Position
complement(3017425..3020769)
Genome browser
AA seq
1114 aa
AA seq
DB search
MKPISLTIAGLHSFREKQTIDFTALCEGGVFGIFGPTGSGKSTILDAMTLALFGSVERAA
NRTQAIINHAEQELFVSFTFELENAAGAKRYTVERSLKKVDEWRTRSAVCRLIEHRSEPV
VLADKLSEVDKAIEQLLGLTMEDFTRAVVLPQGKFAEFLSLKGSERRQMLQRLFHLERYG
DQLNKKLKDRLAAARQEWEKIEAEKAGLGDASKAALEQAEADVRELAGLFAKRKKELEEV
EADVERTKQRWAWQQEKEAVEQELAALRQHESAIRELEAKKERAEQAERIWPYWEQCEQA
CRLRAEAFRRYEGLARRLEEAQLSYEEAARRYERARQEKAQREPELLVQMERLRQAAQLE
QQMEVLGQELAALREERKRLIAQEKAAARRFEEALVWYERGAKRQRELKEELKQHEEALD
GKDEAERAYRQKQHIEQAASAIARVDAQLQQKEAVWRRAKEEKLERERRSAAVGSRLQEL
FRRVERTYRFVCWRQQDAEKQLYTLQKTMEAERQRAEEARTAQLASALAERLCPGEPCPV
CGSREHPHPAAAPHDVQLERLSELEAERQRYEQDWQMIISFKAQLEQLAELAAGHEAPSL
FAESRSVEEAVDLTVEVRALAQDVIELKEAVYRVLAQWNEAESARREAEKACQWIAADIE
ALQVEKQRLEEERRQLEQQWRQMYPFLSLETIDAVYEQLCERENVRRDVQKRLEDSVLFL
EEKQRAKEEAAKERSRLETERVRLDSLISAKQQQWNEYERQRGEKAGEGPAAVKLQKAEA
EWRQLQNGEQQAYEAWQRAQREYQMLESETKAAKQAWEEGVRREEEARARFCSAISDTMF
TDAEQVKQAKAEKAQRDEWDETIRRYWRQIEQAEHRLAQLDAAIGGAAVSAEQWETMQRV
YAELKEQVEAMTQQLGAAQAKVEELRKKHSRFVELEEKQAELSRRIERYKQLQALLRGNS
FVEFMAEEQLEQVTAMASERLQRLTRHRYSLELDSQGGFLIRDDANGGVRRPVSTLSGGE
TFLTSLSLALALSAQIQLRGEYPLRFFFLDEGFGTLDAELLETVISALEKLHTERLAVGV
ISHVQEIRHRLPRRLIVEPAEPSGRGTRVWLEMM
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatctcgctgacgatcgccgggcttcatagctttcgtgaaaagcagacgatc
gatttcaccgcactgtgtgagggcggtgtgttcggcattttcgggccgactggaagcggc
aaatcaacgattttagacgccatgacgctcgccttgttcggcagcgtcgagcgggcggcc
aaccgcacgcaggcgatcatcaaccacgcggagcaagagttgtttgtctcgtttacgttt
gagctggaaaatgcggcaggagcgaaacggtatacagtcgaacgaagcttaaaaaaagtg
gacgaatggcggacgcgcagcgccgtttgccgcctaatcgagcatcggtccgagccggtc
gtgctcgccgataaactgtcggaggtggacaaggcgatcgagcaattgctcggcttgacg
atggaggatttcacccgggcggtcgtcttgccgcaaggaaaatttgccgaatttttatcg
ctcaaagggtcggagcggcggcaaatgctgcagcgcctcttccatcttgagcggtatggc
gatcagttgaataaaaagttgaaagaccggcttgccgccgctcggcaagaatgggaaaaa
atcgaagcggaaaaagcggggcttggcgatgcttcaaaagcagcgctcgagcaggcagag
gcggatgtgcgggagctcgcggggctgtttgccaagcgaaaaaaagagcttgaggaagtc
gaagcagatgtggaacgaacaaaacaacgatgggcatggcagcaagaaaaagaagcggtc
gaacaagagctcgccgcgctgcgccaacatgaatccgccatccgcgagcttgaggcgaaa
aaggagcgcgccgagcaagcagagcgcatctggccgtattgggagcagtgcgagcaggca
tgtcgcttgcgggcagaggcgtttcgtcggtatgaaggactggcgcgtcggttagaagaa
gcccaattgagctatgaagaagcggcgcggcgttatgaacgggcgcgccaagaaaaggcg
cagcgcgaaccggaattgctcgtccagatggaacggctgcggcaggcggcgcagcttgag
cagcaaatggaagtgcttggacaggagctcgcagctcttcgtgaagagaggaagcgactc
attgcccaggagaaggcagctgcacgccggtttgaagaggcgttagtctggtatgagcgc
ggcgcgaagcggcagcgggagttgaaagaagaactgaaacagcatgaagaggcgctggat
ggaaaagatgaggcagagcgggcgtacaggcagaagcagcatattgagcaagcggcgtca
gccatcgctcgcgtcgatgcccaacttcagcaaaaggaggccgtttggcgtcgggcgaaa
gaggaaaagttggagcgggaacgccgatcagccgctgtcggctcccggcttcaagagctg
ttccggcgtgtggagcggacgtatcgtttcgtctgctggcggcagcaggacgctgaaaaa
caattgtatacgttgcagaaaaccatggaggcggagcgacagcgagccgaagaagcgcgg
acggcgcaactcgcctccgccttggctgagcggctctgtcccggcgagccgtgtccagtg
tgcggatcacgcgagcatccgcatccggccgccgcaccgcacgatgtccaacttgagcgt
ctgtccgagcttgaggcagagcggcaacggtatgaacaagattggcaaatgatcatttcg
ttcaaggcgcagctcgagcagctcgccgagctggcggcaggccatgaagcgccgtctctg
tttgccgaaagccgctcggtggaggaggccgtcgacctcactgtggaagtgcgggcgctt
gcgcaagatgtcattgaattgaaagaagcggtctaccgggtgcttgcccaatggaatgaa
gccgagtcagcgcggcgcgaagcggagaaagcgtgccaatggatagcggcggacatcgaa
gcgctgcaagttgaaaagcagcggctggaggaagagcggcggcaacttgaacagcaatgg
cggcagatgtatcctttcctttcgcttgagacgatcgatgcggtgtatgaacagctgtgt
gaacgggaaaacgtgcggcgcgacgtgcaaaaacggctggaggacagcgtgctgttttta
gaggaaaaacagcgggcgaaagaggaagcggccaaagagcggagccggcttgagacggag
cgggtgcgtcttgactcgctgattagtgccaaacagcagcaatggaacgaatatgagcgg
caacggggcgagaaggcgggggaaggtcctgcggccgtgaagcttcagaaggcggaggcc
gaatggcgtcagctgcaaaacggcgagcaacaggcgtatgaggcctggcagcgagcccag
cgggaatatcaaatgcttgaaagcgaaacaaaagcagccaagcaggcgtgggaagaaggc
gtccgccgcgaagaagaggcgcgcgcccgcttctgcagcgcgatttcggacacgatgttt
accgatgccgaacaagtcaagcaagcgaaggcggaaaaagcgcaacgggatgaatgggat
gagacaatccgccgctattggcgccaaatcgagcaagccgaacatcgcctcgcccagctg
gacgccgccatcgggggagcggcagtgagcgctgaacaatgggagacgatgcagcgtgta
tacgccgagttgaaggagcaagtggaggcgatgacgcaacagcttggggcggctcaagcg
aaggtggaagagttgagaaaaaaacatagccgctttgttgaactggaggagaagcaggcg
gagctcagccggcgcatcgagcggtataaacagctgcaggcgctgcttcgcggcaacagc
tttgtcgaatttatggctgaagagcagctcgagcaagtcaccgccatggcttcggaacgg
ctgcagcggctgacacggcaccggtattcgctcgaattggattcgcaaggcgggtttctg
atccgtgatgatgccaatggcggcgttagacggccggtatcgacgctctcgggtggggag
acatttttgacgtcactgtcgttggcgttggcgttatcggcgcaaattcagctgcgcggc
gagtatccgctccgctttttcttcttggacgaagggtttggcaccctcgatgctgagctg
cttgagacggtcatttccgccttggaaaagctgcataccgagcggctggcggtcggtgtc
atcagtcatgtacaagaaattcgccaccgtctgccgcgacggctcatcgtcgaaccggct
gaaccgtccggccgcggcacgcgtgtctggctggaaatgatgtga
DBGET
integrated database retrieval system