Geobacillus sp. C56-T3: GC56T3_2878
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Entry
GC56T3_2878 CDS
T01245
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
gct
Geobacillus sp. C56-T3
Brite
KEGG Orthology (KO) [BR:
gct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gct03400
]
GC56T3_2878
DNA repair and recombination proteins [BR:
gct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GC56T3_2878
Archaeal homologous recombinant proteins
GC56T3_2878
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Epimerase_2
CobU
AAA_lid_BCS1
Motif
Other DBs
NCBI-ProteinID:
ADI27820
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Position
complement(3020766..3021944)
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AA seq
392 aa
AA seq
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MRILHTADWHLGRTLEGRSRMAEQEAFVDELVEIVKKEQIDIILVAGDVFDSVNPPAAAE
QLFYESLARLSDKGRRPVAVISGNHDHPDRISAARTLMCAHNIFLFGRPQAAVCRIDVPS
CGETMMLAPLAYPSESRLAELLSSDCKETTMRDRYDDRIRALLAAMAASFTAETVNIAMS
HLYVAGGRTSDSERPIEVGGAYTVAAESLPKAAQYVALGHLHRPQDVKQAKTAARYSGSP
LAYSFSEAGQAKSVTVVDVHPGRKAKVAEIPLAAGKPLIRWKATEGLAQVYRWCEEGRDR
SSWIDLEIHVTESLTMEEIDRLRKLHPGFVHIRPVLPNRAEEMMEMSREPLSLEEMFHRF
YERQTGGQTPDEELVRLFLELAAEEEKEGEGE
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgcggattttgcataccgcggactggcatttggggcgaacgcttgagggacggagtcgg
atggccgagcaagaggcatttgttgatgagcttgtggagattgtcaagaaagaacaaatt
gacatcatccttgtggccggcgacgtattcgactccgtcaatccgccggcggctgcggaa
caactgttttatgaaagcctcgcccgcctgtccgacaaaggacgccgcccggtggcagtc
atcagcggcaaccacgaccaccccgaccggatcagcgctgcccggacgttgatgtgtgcg
cacaacatttttcttttcggccgcccgcaagcggctgtttgccggattgacgttccatcg
tgcggcgaaacgatgatgcttgctccgttggcctatccgtccgaatcgcgcctcgccgag
ctgttgtcatccgactgtaaggagacgacgatgcgcgatcggtacgatgaccgcatccgc
gccctattagcggcgatggccgcctcgttcacggcggagaccgtcaatatcgcgatgagc
catctttacgttgccggcggacgtacgtccgattccgagcggccgattgaagtcggcggc
gcttatacggtggcggctgagagcttgccgaaagccgcacaatatgtggcgcttggccat
ctgcaccggccgcaggatgtcaagcaggcaaagacggcggcgcgctattccggctcgccg
ttggcgtacagcttttccgaagccggtcaagccaaatcggtcacggtcgttgacgtgcat
ccaggcaggaaggccaaggtggcggagataccgctcgctgccggcaaaccgctcatccgt
tggaaggcgacagaggggctcgctcaagtataccgctggtgtgaggaaggaagagaccga
tcaagctggatcgatttggagatccatgtgaccgagtcgttgacaatggaagaaattgat
cggctgcgtaagcttcatcccggatttgtccacattcgcccggtgcttcccaatcgggcg
gaagagatgatggaaatgagccgcgagccgctttcacttgaagaaatgtttcaccgcttt
tacgaacggcagactgggggacaaacgccggatgaagagctcgtccgcctctttttggag
ctggcggcggaagaagagaaggaaggggagggagaatga
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