Geobacillus sp. C56-T3: GC56T3_2880
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Entry
GC56T3_2880 CDS
T01245
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
gct
Geobacillus sp. C56-T3
Brite
KEGG Orthology (KO) [BR:
gct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gct03400
]
GC56T3_2880
Enzymes [BR:
gct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GC56T3_2880
DNA repair and recombination proteins [BR:
gct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GC56T3_2880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
AAA_22
DEAD
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ADI27822
LinkDB
All DBs
Position
complement(3025694..3029212)
Genome browser
AA seq
1172 aa
AA seq
DB search
MVVDTMSLRFLLGRSGSGKTAVCLEEIRRQLQEDPKGRAIVYLVPEQMTFQCEYALIHTE
GVDGMIRAQVFSFTRLAWRVLQETGGMTRYHIHDVGVQMMIRKIIEQRKQELKLFGRAAD
KHGFIEQLNEMITECKRYCLTPGELRRHAEAFEDGPDQPGRRLLADKLSDVALVYEELEK
SLIGHYLDSEDYLRLLAEHIPRSSYLRDADIYIDGFHHFAPQEYMIIEQLLRHCRRVTVC
LTIDRPYDDGMPDELHLFYLPAQTYRQLRELALSNDIAIEEPIVLSANRRHEDRALVHLE
AQFHRRPLLPYGAKTDAVHLYEASNRRAEIEAVAREIIRLVRDEGARYRDIALIIRQTEA
YRDLVKTVFFDFGIPYFMDEKEPMHHHPLIELVRAALETVVTRWRYEAVFRAVKTDLLFP
TDGDLHMWREAADKLENYVLAYGIKGDKWTNNERWAYLRYQALDGLNVPQTNEERQFEDM
LNEWREALAPPLRRLERRLRRAEDGRGFCMALYLFLEELQIPKKLEKMSAQAEADGRLVE
ARQHEQAWNAVVDLLDQYVEMLGTESLPLAEFVKIIEAGLDRLEFSLVPPAMDQVIVAQL
DRSRLIDIKYAFVIGANDGVIPAKVKEDGLMAEVEREQLRELGVALAPGGREQLFYDPFF
VYLALVCPSRRLYVTYPLADGEGKALMPSPLIKQLTELFPHAPVHLCGNDPFDAPAEKAE
AFVTAPRATQTYLISQLRAWKRNYGIDPLWWDVYNTFIGHQDWKEQVRHAVSALFYTNGA
TPLKKQWSQRLYGKKIQASVSRMEQFQKCPYAHFASHGLRLKERNVFRLEAPDVGQLFHA
AIKQIADRLREQHLDWRELSRPDCERLSAEAIERIAPLIQQQVLSSSHRYEYMKRKLKHV
VARTTHVLSEHARASGFVPIGLELSFGPNGDLPPLRFRLPDGTVMELVGRIDRVDKAESS
QGVLLRIIDYKSSAKTLDLTEVYYGLALQMLTYLDIVLTYAEQLVGQPALPAGVLYFHIH
NPIVQAKQWVDDEVEMAKKLLEPFRMRGLLLADVEAIRLMDSRTEDGQWSLIVPAQLTKS
GSIHSRSSVASPSDFAALRQHVRRLFIDIGGQIADGVVSIAPYKLKDKTACEFCVFKPVC
QFDEALSGNEYRKLAPQTKEAVIEKLAEGKEG
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggatacaatgtcgctgcggtttttgctcggacggtcaggaagtgggaaaacg
gctgtctgcctcgaagaaattcgccgccagttgcaagaggatccaaaaggaagggcgatc
gtctatctcgttccggagcaaatgacatttcaatgcgaatacgcgttgatacataccgag
ggagtggacgggatgattcgcgcccaagtgttcagcttcacccgtctcgcttggcgcgtg
ctgcaggaaacaggcggcatgacccggtaccacattcatgatgttggcgtgcagatgatg
atccgcaaaattattgagcaacgcaaacaagagctgaaactgtttggccgcgcggcggac
aaacatgggtttatcgagcagctgaacgaaatgatcaccgaatgcaaacggtattgcctg
acgccgggcgaactccgccgacatgctgaggcgttcgaggatgggcctgatcaaccgggc
cgccgcttgctcgctgacaagttgagcgatgtcgcgcttgtgtatgaggaacttgagaaa
agtcttatcggccactatcttgattcggaagattatttgcgcttgctcgctgagcatatt
ccgcgctcaagttatttgcgggatgccgatatttacatcgacggctttcatcattttgcg
ccgcaagaatatatgatcatcgaacagcttcttcgccattgccggcgcgtcaccgtttgt
ttgacgatcgaccgcccgtatgacgacggaatgccggacgaacttcatctcttttatttg
ccggcgcaaacgtaccgccagctgagggagttggcgctaagcaatgacattgcgatcgaa
gagccgatcgtgctttcggccaaccgacgccatgaagacagggcgctcgttcatcttgag
gcgcaatttcaccgacgcccgttgcttccatatggtgcaaagaccgatgccgtccatctt
tatgaggcgtccaatcgccgagcggaaatcgaagcggtcgcacgcgaaatcatccgcctt
gtccgcgatgaaggggcgcgctatcgcgacattgcgctgatcatccgccagacggaggcg
taccgcgatctggtgaaaacggtgttttttgattttgggatcccgtattttatggatgaa
aaagaaccgatgcaccaccacccgctcattgaactcgtgcgcgctgccttagagacggtc
gtgacgcgttggcgatatgaagcggtgtttcgggcggtgaaaacggatttgctttttcca
acggacggcgatctgcacatgtggcgcgaggcggccgacaagctcgaaaactatgtgctt
gcttacggaatcaaaggggataagtggacaaacaatgagcgctgggcgtatctgcgctat
caggcgcttgacggtttgaacgtaccacaaacgaacgaagagcggcagtttgaggacatg
ctcaatgaatggcgcgaggcgttggcccctccgcttcgccggttggagcgccgtctgcgc
cgggcggaggacggacgcgggttttgtatggcattatatctgtttttggaagaattgcag
attccaaaaaaactagagaaaatgagcgcacaagcggaagcggacggccgcctcgttgaa
gcgcgccagcatgaacaggcgtggaacgccgtcgtcgatttgcttgaccaatatgtagaa
atgctcgggacagaatcactgccgctcgctgagtttgtcaagattatcgaggctgggctc
gatcggttggagttctcccttgtgccgccggcgatggaccaggtgatcgtggctcagctt
gatcgctctcgtttaattgacatcaagtatgcgttcgtcatcggcgccaacgatggcgtg
attccagcgaaagtgaaggaagacgggctgatggcggaagtggagcgcgagcagctgcgt
gagttgggggtggcgctcgccccagggggacgggagcagctgttttatgacccgtttttt
gtctacttggcacttgtttgtccgagccggcggctgtatgttacatatccgcttgctgat
ggagaagggaaagcgttgatgccgtcgccgctcatcaagcagcttacggaactgtttccg
catgcgccggtgcatctgtgcggcaacgacccgttcgacgccccggcagaaaaagcagag
gcgttcgtgaccgcgccgcgggcgacgcaaacgtatttgatcagccagctccgagcatgg
aagcgcaactacggcatcgatccgctttggtgggatgtgtataacacgttcatcggccat
caggactggaaggagcaggtgcggcatgccgtctccgcgctcttttatacaaacggagcg
acgccgctcaaaaaacagtggagccagcggctgtacggcaaaaaaattcaggcgagcgtc
tcgcgcatggagcagtttcaaaaatgcccgtacgcccatttcgcatcgcatgggctgcgg
ttgaaagagcgcaacgttttccgacttgaggcgccggatgttgggcaattgttccatgcc
gccatcaagcaaatcgccgaccggctgcgcgaacagcatcttgattggcgcgaactgtca
agaccagactgtgaacggctgtcggccgaagcgatcgagcgaatcgctccgctcatccag
cagcaagtgctctcaagctctcatcgctatgaatatatgaaacgaaaattgaaacacgtc
gttgcccgtacaacccatgtgttaagtgagcatgcgcgggcgagcggtttcgttccgatc
ggacttgagctgtcattcggccccaatggcgacctgccgccgcttcggtttcggctgccc
gacggaacagtgatggagcttgttgggaggatcgaccgcgtcgataaggcggaaagcagc
caaggagtgcttctgcgcattatcgattacaaatcgagcgcgaaaacgctcgatttgacg
gaagtatattacggtctggcgctgcaaatgctcacctacctggacatcgtgctgacgtat
gccgaacagcttgtcggacagccggccttgccagccggggtgctttattttcacatccac
aatccgatcgttcaagcgaagcaatgggtggatgatgaggtggaaatggcgaaaaagctg
ctggaaccgtttcggatgcgcgggctgttgctcgctgacgtcgaggcgatccggttgatg
gacagccgaacggaagacggacaatggtcgctgattgtgcccgctcagcttacgaaaagc
gggtcgatccattcgcgttcgtcggtggcgagtccatccgactttgccgcgctccgccag
catgtccgccgtttgttcatcgacatcggcgggcaaatcgccgacggcgtcgtgtcgatc
gccccgtacaagttgaaagataaaacagcgtgcgagttttgcgtcttcaaaccggtctgc
caatttgatgaggcactctccggcaacgaataccggaagcttgccccgcaaacgaaggaa
gcggtcatcgaaaaactagcggaagggaaggaaggataa
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