Geobacillus sp. C56-T3: GC56T3_3012
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Entry
GC56T3_3012 CDS
T01245
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
gct
Geobacillus sp. C56-T3
Pathway
gct00630
Glyoxylate and dicarboxylate metabolism
gct00680
Methane metabolism
gct01100
Metabolic pathways
gct01120
Microbial metabolism in diverse environments
gct01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
gct00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GC56T3_3012
09102 Energy metabolism
00680 Methane metabolism
GC56T3_3012
Enzymes [BR:
gct01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
GC56T3_3012
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_4
NADH-G_4Fe-4S_3
Fer4
Fer4_7
Fer4_2
Fer4_6
Fer4_8
Fer4_21
Fer4_10
Fer4_9
Fer4_18
Fer4_15
Fer4_16
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
ADI27949
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All DBs
Position
3160219..3163182
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AA seq
987 aa
AA seq
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MEAQMVTVTINERTYHAKPGMTILEVVNEHGLPHPQVCYTPELGAIQTCDTCIAEVNGTL
LRACATPVEDGMVVELGSPRAKAAQKEAMDRLLENHLLYCTVCDNNNGNCKLHNTAEMMQ
IEHQTYPYRPKVDPSEVDMSHPFYRYDPNQCIACGQCVEACQNLQVNETLSIDWEAERPR
VVWDGGVPINESSCVSCGHCVTVCPCNALMEKSMLGEAGFLTGLDKDVLNPMIDFVKEVE
PNYTSIFAISEIEAAMREQRIKKTKTVCTFCGVGCSFEVWTKGRKILKVQPVSEAPVNAI
STCVKGKFGWDFVNSEERLTKPLIRKGDVFVESTWDEALDLVAEKLGAIKRQYGGNAIGF
ISSSKISNEENYLMQKLARQVFETNNVDNCSRYCQSPATDGLFRTVGMGGDSGTIHDIAS
AGLVIIIGANPAEGHPVIATRVKRAHKLFGQKLIVADLRRNEMAERADLFIRPKQGTDQV
WLMAVTKYIIDQGWHDEAFIRERVHFFEEFKQLLEKYTLDYAEQVTGVAKADLIRIAEMI
HEADGTCVLWGMGVTQNTGGSDTSAAISNLLLATGNYGRPGAGAFPLRGHNNVQGACDMG
SLPAWLPGYQHVTDDEARAKFEKAYGVRIDAKPGLDNIQMLEAAERGELKAMYIIGEDMA
LVDCNANHVQETLAKLDFVVVQDIFLSKTAQFADVILPAAPSLEKEGTFTNTERRIQRFY
QALEPLGDSKPDWWIIQEIAKRLGADWNYAGPKEIMDEIASLAPLYSQAHYDRLEGWNSL
CWGSHDGADTPLLYKERFNFPDGKARFALADWVEPVQYPEEYDLLVNNGRLLEHFHEGNL
TYKSKGIEHKFPEVFVEVSPELAKERGIEDGALVRLISPYGRVKVRVLVTDRVRGNELFL
PMHSTANESAINMLTGPQTDHRTNTPAYKQARVRMEVIERSGKTPLPRTNPRFKKRHPQN
GVEVERKWRRSDYVPLTEENKGVTIGG
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgcaaatggtgacggtaaccatcaacgagcgtacctaccacgccaagccaggg
atgaccattttagaagtcgtcaatgaacacggtcttccgcatccgcaagtttgttatacg
ccggagcttggcgccattcagacatgcgacacgtgcatcgctgaagtcaatggaacgctg
cttcgtgcctgtgcgacaccggttgaggacggcatggtcgtcgaactcggctcgccgcgg
gcaaaggcagcgcaaaaagaagcgatggaccgcctgttggaaaatcatctcttgtactgt
acggtgtgcgacaacaacaacggcaactgcaagctgcacaacacggcggaaatgatgcaa
attgaacatcaaacatatccgtaccggccgaaagtcgacccgtccgaggtggacatgtcg
catccgttctaccgctacgacccgaatcaatgcatcgcctgcgggcaatgcgtcgaggcc
tgccaaaacttgcaagtgaacgaaacgctttcgatcgattgggaagcggaacggccgcgc
gtcgtttgggacggtggggtgccgatcaacgaatcgtcgtgcgtcagctgcgggcattgc
gtcactgtctgtccgtgcaacgcgttaatggaaaaatcgatgcttggcgaagcgggcttt
ctcaccggcttggacaaagacgtcctcaacccgatgatcgattttgtcaaggaagtcgag
ccaaactatacgagcattttcgccatttctgaaatcgaggcagccatgcgcgaacaacgg
atcaaaaagacgaaaacggtttgcacgttctgtggcgtcggctgttcgtttgaagtgtgg
acgaaagggcggaaaattttaaaagtccagccggtatccgaagcgccggtcaacgccatt
tccacatgcgtcaaaggaaaattcggctgggatttcgtcaacagcgaagagcgcctaacg
aaaccgctcattcgcaaaggcgacgtattcgtcgagtcgacatgggacgaagcactcgac
ttggtcgcggaaaagctcggggcgatcaagcggcaatacggcggcaacgccatcggtttt
atttcatcgtcaaaaatttccaacgaagaaaactatttaatgcaaaagctcgcacggcaa
gtatttgaaacgaacaatgtcgacaactgttcgcgctactgccagtcgccggcgacggac
ggcctgttccgcacggtcggcatgggcggcgattccggcacgattcatgacatcgcttca
gccggccttgtcatcatcatcggcgccaacccagcggaagggcatccggtcatcgccacc
cgcgtcaaacgggcgcataaactgtttggccaaaaactcattgttgcggacttgcgccga
aatgaaatggccgagcgggctgacctgttcatccgcccgaaacaaggcaccgaccaagta
tggctgatggccgtgacaaaatacatcatcgaccaaggctggcacgatgaggcattcatt
cgcgagcgcgttcatttctttgaagagtttaaacaattgctggaaaaatatacacttgat
tatgccgaacaagtcaccggcgtcgccaaagccgacctcatccgcatcgccgagatgatc
cacgaagcagacggcacgtgcgtcctctggggcatgggggtcacgcaaaacacgggcggc
agcgatacatcggcggcgatttccaacttgcttttggcaaccggcaactacggtcgtccg
ggggcgggcgcgttcccattgcgcggccataacaacgtccaaggcgcctgcgacatgggt
tcgcttcctgcctggctgcctggctaccaacatgtcaccgatgatgaggcgcgagcgaag
tttgaaaaagcgtacggcgtccgcatcgatgcgaaaccaggccttgacaacatccaaatg
ctcgaagcggccgagcgcggcgagctgaaagcgatgtatatcatcggcgaagatatggcg
cttgtcgactgcaacgccaaccatgtgcaagagacgttggcgaagcttgactttgttgtc
gttcaagacattttcttgtcaaaaacggcgcaatttgctgatgtcatcttgccagcagcg
ccaagtttggaaaaggaaggaactttcacgaataccgagcgccgcatccaacggttttac
caagcgctggagcctcttggcgactccaagccagactggtggatcattcaagaaatcgcg
aagcggcttggcgccgattggaattacgccggtccgaaagaaatcatggatgaaatcgcc
agcctcgctccactgtactcacaagcgcattacgaccggctcgagggctggaacagcctt
tgctggggcagccacgacggcgctgatacgccgctgttgtacaaagagcggttcaacttc
ccggacggcaaagcccgctttgcgttagccgattgggtcgaaccggtgcaatatccggaa
gagtacgatttgcttgtgaacaacggccgattgctcgaacatttccatgaaggaaacttg
acgtacaaatccaaaggcatcgagcataaattcccagaagtgtttgtcgaagtatcccct
gaactcgccaaagaacgcggcattgaagatggggcgctcgttcggctcatctcgccgtac
ggccgcgtcaaagtgcgcgtgctcgtcaccgatcgagtcagaggcaatgaactgttcttg
ccgatgcactccacagccaatgagagcgccattaacatgctgaccggcccgcaaaccgac
catcgcacgaacacgccggcttacaaacaagcccgcgtgcgcatggaagtcattgaacgg
tccggcaagacgccgctgccgcgcacaaatccgcgctttaaaaagcggcatccgcaaaac
ggcgtcgaggtggagcggaagtggcggcgaagcgactacgtgccgctcaccgaggaaaac
aagggggtgacgatcggtggctaa
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