Geobacillus sp. C56-T3: GC56T3_3410
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Entry
GC56T3_3410 CDS
T01245
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
gct
Geobacillus sp. C56-T3
Brite
KEGG Orthology (KO) [BR:
gct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gct03021
]
GC56T3_3410
Transcription machinery [BR:
gct03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GC56T3_3410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
HTH_38
HTH_23
Sigma70_r4_2
KORA
HTH_3
HTH_24
HTH_31
HTH_28
HTH_10
HTH_Tnp_ISL3
HTH_50
HTH_Crp_2
Xre-like-HTH
Trp_repressor
HTH_Tnp_4
Sigma70_ECF
HTH_11
HTH_37
MarR_2
GerE
MarR
Phage_CI_repr
GntR
HTH_1
DUF1451
Motif
Other DBs
NCBI-ProteinID:
ADI28323
LinkDB
All DBs
Position
3581300..3582070
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AA seq
256 aa
AA seq
DB search
MTVYPPPLSKSKLDALISAYQQTKTEEAATALLVRFEPLIAAAAKKMARSRPDFYEDLFQ
IGRLSFLRLLDHYDPKQGTSFESYAMKSLIGYMKNYLRDKAWYIQVPRKVKEKGSKVQQA
IDELTVKLERSPTLDEIAGHLGLSVEETIEILAGRDHYQAVSLDAPVQDGEKDATTIGDF
VADEANEIESLIERMDLEQAIGKLSEQEQIVIDAIFRRGETQRALAERLGVSQMTISRIQ
KRAIAKLKRELAAYSS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgactgtatatccccctcctctgtccaagagcaagcttgacgccctcatttccgcctat
caacaaacaaaaacggaagaagcggcgaccgccttgctcgtgcgcttcgagccgctcatt
gcggccgcagcgaaaaaaatggcgcgcagccgccctgacttttacgaagacttgtttcag
atcggacggctgtcgtttttgcgtctccttgaccattacgaccctaaacaaggaacaagc
tttgagtcatacgccatgaaaagcttgatcggctatatgaaaaactatttgcgcgacaaa
gcatggtacatccaagtaccgcgcaaggtgaaagaaaaaggaagcaaagtgcagcaggcg
atcgatgagctgaccgtcaagctcgagcgttcgccgacgctcgatgagatcgccggccac
ttaggcttatcggtcgaagaaacgatcgaaattttggccggacgggaccattaccaagcc
gtttcgctcgatgccccggtgcaagacggggaaaaggatgcgacgacgatcggcgatttc
gtcgcggatgaagcgaacgaaatcgagtcactgatcgagcgaatggatttagagcaggcg
atcggcaaactgagcgagcaagaacaaatcgtcatcgacgccattttccgacgcggggaa
acgcaacgcgcgctcgctgagcggctcggcgtctcacaaatgacgatcagccgcattcaa
aagcgggccatcgcgaaattaaagcgggagctcgccgcctattcgtcataa
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