Gloeomargaritales cyanobacterium VI4D9: LQF76_01275
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Entry
LQF76_01275 CDS
T08937
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
gcy
Gloeomargaritales cyanobacterium VI4D9
Brite
KEGG Orthology (KO) [BR:
gcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gcy03009
]
LQF76_01275
Enzymes [BR:
gcy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
LQF76_01275
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
LQF76_01275
Ribosome biogenesis [BR:
gcy03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LQF76_01275
23S rRNA modification factors
LQF76_01275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
WAS05549
LinkDB
All DBs
Position
complement(283478..284269)
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AA seq
263 aa
AA seq
DB search
MKERLDTLLVTLGHCPSRQQAQRAIQAGWVQVNQRVVDKPGTLVPIDSCITLYARPPYVS
RGGEKLAHALHTFGLGVADRVALDGGISTGGFTDCLLKHGARRVYGVDVGYGQVAWELRQ
DPRVRLWERTNLRHLQPPQLYQPDDPWADLGVVDVSFISVTKVLPALWQLLAPPREAVIL
VKPQFEVGRAQIAKGGVVKHAQAQVQAIRQVATSAEALGWQVQGLTPSPLKGPAGNCEYL
LWLGTTGNRLEWDESALVRMISR
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagaacgtctggataccctgctggttaccttgggacattgccccagccgccaacag
gcgcaacgagccatccaagcgggttgggtgcaggtcaatcaacgggtggtggataaaccg
ggtaccctggtgccgattgacagttgcattaccctgtacgcccgaccgccctacgtgtcc
cggggtggggaaaaactcgcccatgcccttcacacctttgggctaggggtggctgaccgg
gtggcgttggatgggggtatttccaccgggggttttaccgattgtttattaaagcatggt
gcccgccgggtgtatggggtggatgtgggctacgggcaggtggcctgggaattgcgccaa
gacccccgggtgcggctgtgggaacgcacgaatctccggcatctgcaacccccacaactc
taccagcccgatgacccctgggcggatttgggggtggtggatgtgtcgtttatttcggtg
acgaaggttttaccagccctatggcagttgttggctccgccccgggaagcggtgattttg
gtcaagccccaatttgaggtgggtcgggcgcagattgccaaaggcggggtggtcaagcat
gcccaggcgcaggtgcaggcgattaggcaagtggcaacgagtgccgaagctctgggttgg
caggtgcaggggttgaccccctcccccctcaaaggcccggcgggaaattgcgagtatctg
ctgtggctggggacaaccggcaaccgccttgaatgggatgaatcggcacttgtccgcatg
atttcccgatga
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integrated database retrieval system
