Gloeomargaritales cyanobacterium VI4D9: LQF76_01335
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Entry
LQF76_01335 CDS
T08937
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
gcy
Gloeomargaritales cyanobacterium VI4D9
Brite
KEGG Orthology (KO) [BR:
gcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gcy03400
]
LQF76_01335
DNA repair and recombination proteins [BR:
gcy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LQF76_01335
Archaeal homologous recombinant proteins
LQF76_01335
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WAS05561
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All DBs
Position
complement(293513..294799)
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AA seq
428 aa
AA seq
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MGIKILHISDIHLGSGQNHGRTNPLTGLNTRVEDFHRALQTAVDQALNLPVDVVLFTGDA
FPDATPAPWIQELFAQQFLRLVAAQIPVLLLVGNHDQHTQGEGGASLSIYRALQVPGVLV
GESLTTNTLETRNGAIQIVTLPWITRSMLLTKPETQGLSMTEINELLLTRLREVLAGEIL
NLDENIPAILAAHVMADKAVFGAERLLSAGKNLTVPLSLLAQPCFRYVALGHVHRHQVLC
EKPPVVYAGSIERVDFSEEEEQKGYVLIDINPTETYFEFCPLPTRLMRTIRVDVTQSADP
QTELLTRIQNTPIADGIIRLIYRLQAEQLPKINEAQIRSALATAHSYTLQPELVNEQPRQ
RVTQVDLSQVLDPMTVLEQYVREHEHLHPLKTDLLAAAQALLAGVEPEWTEAPPAIPTPE
TAQLPLSF
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggggattaagattctgcatatttccgatattcatttaggaagcggtcaaaatcatggg
cgtaccaaccccctgacgggcttaaatacccgggtggaggattttcatcgggcgttgcaa
acggcggtggatcaggcgttgaacctaccggtggatgtggttttattcaccggcgatgcc
tttcccgatgctacccctgccccttggattcaggagctatttgcccaacagtttctccgg
ttggtggcggcgcagattccggtacttttgttagtcggcaatcacgaccaacacacgcaa
ggggaggggggtgcgtccctgtccatttatcgtgccctgcaagtgccgggggtgctggtg
ggggaatccctgaccaccaataccctggaaacccgtaatggagccatacaaattgtcact
ttgccctggattacccgctcgatgctgttaaccaaaccggaaacccaagggctatccatg
actgaaattaacgagctattactcactcgattgcgggaggttttagcgggagaaattctg
aatttagatgagaatattcctgctattttagcggcgcatgtgatggcggataaagcggta
tttggggcggaacgactcctctcggcggggaaaaatttaaccgtaccgttgtccctctta
gcccaaccctgttttcgctatgtggctttgggtcatgtgcatcgccatcaggtgttgtgt
gaaaagccgccggtggtttatgctggcagtattgaacgggtagatttcagtgaagaagag
gaacaaaaagggtatgttttgattgacattaacccgacggaaacttactttgaattttgt
cctttgcccacccgtttgatgcgaaccattcgggtagatgtgacccaatccgctgaccca
caaacggaactgttaacccggattcaaaacacacccattgctgatggaattattcggctc
atttatcgcctccaagcggaacaattgcccaaaattaatgaagcccaaattcgctccgcc
ttggcaaccgcccatagctacaccctgcagccggaattggtcaacgaacagcccagacaa
cgggtgacgcaggtggatttgagtcaggtgcttgacccgatgacggtgctggaacaatat
gtgcgggaacatgaacatttgcaccccctcaaaacggatttactggcggcggcacaggcg
ttgttagcaggcgtagaaccggaatggacagaggcacccccagccatccctaccccggaa
acggcgcaattacccctcagcttttga
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