Gloeomargaritales cyanobacterium VI4D9: LQF76_01360
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Entry
LQF76_01360 CDS
T08937
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gcy
Gloeomargaritales cyanobacterium VI4D9
Pathway
gcy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LQF76_01360 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gcy03019
]
LQF76_01360 (groL)
03110 Chaperones and folding catalysts [BR:
gcy03110
]
LQF76_01360 (groL)
03029 Mitochondrial biogenesis [BR:
gcy03029
]
LQF76_01360 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gcy04147
]
LQF76_01360 (groL)
Enzymes [BR:
gcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LQF76_01360 (groL)
Messenger RNA biogenesis [BR:
gcy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LQF76_01360 (groL)
Chaperones and folding catalysts [BR:
gcy03110
]
Heat shock proteins
HSP60 / Chaperonin
LQF76_01360 (groL)
Mitochondrial biogenesis [BR:
gcy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LQF76_01360 (groL)
Exosome [BR:
gcy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LQF76_01360 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LQF76_01360 (groL)
Exosomal proteins of breast cancer cells
LQF76_01360 (groL)
Exosomal proteins of colorectal cancer cells
LQF76_01360 (groL)
Exosomal proteins of bladder cancer cells
LQF76_01360 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Fzo_mitofusin
YMF19_C
Motif
Other DBs
NCBI-ProteinID:
WAS05566
LinkDB
All DBs
Position
299263..300891
Genome browser
AA seq
542 aa
AA seq
DB search
MVKLISFDEASRKALERGVNTLADAVRVTLGPRGRNVILEKKFGAPEIVNDGATIAKEIE
LSNPMENTGAQLLKEVAEKTGDVAGDGTTTACLLAQAMILEGLKNVTAGANPISLRRGME
RAVQYLVQKIAEISQPVSGSMITQVATISAGNDPEVGDMIGQAMSKVGKDGVITVEESKS
LVTELEVVEGMEIDRGYVSPYLVTDQERMVAEYEYVRLLITDKKISSVADLVPILEKVSR
AGQPLLIIAEDVDGEALATLVVNKMRGVLNVCAIKAPSFGDRRKAMLEDIAILTNGQFIS
EDIGLKLDQVQLDMLGSARRVTVSKDKTVIVAGQDTQTQVQQRIAQIRQQLAETDSEYDR
EKLQERIAKLAGGVAVIKVGAATETELKEKKLRIEDALHATRAAVDEGIIPGGGATLVHL
AKQLATLAQSFGDPEMRTGVEIVSRALSYPLQQIANNSGVTGAIVVEKVRQMDLPMGYNA
LTDTYEDLIAAGIIDPAKVTRTALENAASVAGMFLTTEALVVEKPEPKPTPAPGAGGMGG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagctgatcagttttgatgaagcgtcccgaaaggcgctggagcggggggtcaat
accctagcggatgcggtacgggtcaccctgggaccgcgggggaggaacgtgattttggag
aaaaaatttggtgccccagaaatcgtcaacgatggtgccaccattgctaaagagattgaa
ctgagtaacccgatggaaaacaccggggcgcaactgctcaaggaagtggcggaaaaaact
ggggatgtggctggggatggcaccactaccgcctgtctcttagcccaagccatgattttg
gaagggttgaaaaatgtcaccgccggagctaatcccatcagcctgcgccgggggatggag
cgagccgtgcagtacctggtgcaaaaaattgcggaaatcagccagcccgtgtccggcagt
atgatcacccaggtggcgaccatatcggcgggcaacgacccggaagtgggggatatgatc
ggtcaagccatgagcaaagtcggcaaagacggggtgattacggtcgaagaatccaaatcc
ctggttaccgaactggaagtcgttgagggcatggagatcgaccggggttatgtttctccc
tacttggtcacggatcaggagcgcatggtggcggaatacgagtacgtccgtctgttgatc
accgacaaaaaaattagcagtgtcgccgacctggtgcccatcctggaaaaagtcagccgg
gcggggcaacccctattgatcatcgccgaggatgtggacggggaagccctggcaaccctg
gtggtgaacaaaatgcggggcgtgttaaacgtttgcgccatcaaagccccctcctttggc
gaccggcgtaaggcgatgctggaggacattgccattctcaccaacggtcagtttatttcc
gaagatattggtctcaagctcgaccaagtccagctagatatgctaggcagtgcccgccgt
gtcaccgtgagcaaggataaaaccgtgattgtcgccggtcaggacacccaaacccaggtg
caacaacggatcgcccaaattcggcaacaattggcggaaaccgactcggaatacgaccgg
gaaaaactgcaagaacggattgccaaactcgccggtggggtagccgtgatcaaggtgggg
gcggctacggaaaccgaactcaaggagaaaaaactccgcattgaagatgccctccacgcc
acccgtgccgctgtggatgaaggcattatccctgggggcggggcgaccctggtgcatttg
gcaaaacaacttgccaccctcgcccaatccttcggtgacccggagatgcgaaccggtgtg
gagattgtcagccgtgccctcagttaccctctacaacagattgccaacaacagcggggtg
accggtgccatcgtggtggaaaaagtccggcaaatggacttgcccatgggctacaacgcc
ctcaccgacacctatgaggatttgattgccgccgggatcattgaccccgccaaggtcacc
cgcaccgctttggaaaatgccgcctccgtcgctgggatgttcctcactaccgaggcactg
gtggtagaaaaacccgaacccaaaccgactcccgcccccggtgctggtgggatgggcggc
atgatgtag
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