Gloeomargaritales cyanobacterium VI4D9: LQF76_01745
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Entry
LQF76_01745 CDS
T08937
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gcy
Gloeomargaritales cyanobacterium VI4D9
Pathway
gcy03030
DNA replication
gcy03410
Base excision repair
gcy03420
Nucleotide excision repair
gcy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LQF76_01745 (polA)
03410 Base excision repair
LQF76_01745 (polA)
03420 Nucleotide excision repair
LQF76_01745 (polA)
03440 Homologous recombination
LQF76_01745 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gcy03032
]
LQF76_01745 (polA)
03400 DNA repair and recombination proteins [BR:
gcy03400
]
LQF76_01745 (polA)
Enzymes [BR:
gcy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LQF76_01745 (polA)
DNA replication proteins [BR:
gcy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LQF76_01745 (polA)
DNA repair and recombination proteins [BR:
gcy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LQF76_01745 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LQF76_01745 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WAS05638
LinkDB
All DBs
Position
386684..389503
Genome browser
AA seq
939 aa
AA seq
DB search
MNSPQILLVDGHSLAFRAYYAFAKGRDGGLRTKTGIPTSITYGFLKAVLEVLNQQNFTHL
AVAFDRGEPTFRHAVDADYKAGRVETPADFQVDMANLQALLTALNIPIVAVPGYEADDVL
GTLAKKAAADGFMVKILSGDQDLFQLVNERVKVLHLSNQTSRPVEFAPEQVVEKLGITPA
QIVDYKALCGDSSDNIPGVRGIGAKTAVALLKQYQNLDELYAHLDQLPKAQKQKLMEGKN
DAYHSQFMARIHQDVPLEINWSECQLVGFDILGVMPLLETLELQVFQRQIDQLYTRLGGV
SQLEMDGDLSFFTAADTAQRKPVDLPFQVQIITELSQLEQLVHSLKNCTAIPVAWDTETT
ALDPRDAQLVGIGCCWGKEQVAYIPVGHRQGSQLPLDVVLTHLKPILESPDAPKVLQNAK
FDRNIFLVQGIALQGVVFDTLLASYVLDPEGSHKLADLGEKYLGITSQSYQDLVPKGQTM
ADVAIPLVANYCGMDVYVTFQLMSILRNELAKIPELERVFTEIELPLEPVLAAMEYRGIT
LDLDFLKQLSKEFDQALQHIESQAHALVGQPINLNSPKQLGVLLFETLGLDKKKTRKTQS
GYATDAATLEKLKGEHPVIDLILEHRTLAKLKSTYVDALAELCRPDTGRVHTDFNQTVAA
TGRLSSSNPNLQNIPIRTKIGRQIRRAFIPQSNWLLVSADYSQIELRILAHLSQEPVLIT
AFQRQDDIHRLTAQLLLEKEEITPDERRLAKIINYGVIYGMGPQRFMREAGVSFAEAKAF
IERFNQRYPAVFDYLQNTERQAIVQGYVATITGRRRYFRFTSPLLQQLRGKTLTEVDWET
VQKRLNPVDAGLLRAAANAPIQGSSADIIKIAMIRIHQLLANYQAHLLLQVHDELVFEIP
PSEWPELEPQIKHIMSQAMTLAVPLEVDIHSGSNWQEAK
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccccaaatacttttagttgacggtcattccctggcgtttcgtgcctactat
gcgtttgccaagggacgggacgggggactgcgtaccaaaaccggcattcccaccagcatt
acctacgggtttttgaaggcggttttagaagtattaaatcaacaaaattttacccatctt
gccgtggcatttgaccggggagaacccacgtttcgccatgcggtggatgcggattataaa
gcggggcgggtggaaacaccggcggattttcaggtggatatggcgaatttacaagcccta
ctcaccgccttgaatatcccgattgtggctgtgcccggttatgaagcggatgatgtgttg
ggcaccttagccaaaaaggcggcggcggatggatttatggtaaaaattctctctggggat
caggatttatttcagttagttaatgagcgggtgaaagttttacatttgagtaaccaaacc
agccgcccggtggaatttgccccggaacaggtggtggaaaaattgggaatcacaccagcg
caaattgtggactataaagccctatgtggggacagttcagataacattcccggcgtgcgc
ggcattggggcaaaaaccgctgtggcattgctgaaacaatatcagaatttggatgaactt
tacgcccatttagaccagttacccaaagcccagaaacaaaaacttatggagggcaaaaat
gatgcctatcattcgcaatttatggcgaggattcatcaggatgtgcccttagaaattaac
tggtcagaatgccaattggtgggatttgatatactaggcgtgatgcccctactagaaacc
ctagagttacaagtatttcaacggcaaattgaccaactttatacccggcttgggggtgtt
tcccagttagaaatggatggggacttatccttttttacagcggcagatacggcacaaagg
aaacccgttgatctgccatttcaggtacaaattatcaccgagttatcccaactagagcaa
ctggtacattccctcaaaaactgcacggcaatccccgtcgcctgggatacggaaacgact
gcccttgaccctcgggatgcccaattggtcgggattgggtgctgttggggtaaagaacag
gttgcctatattccggtcgggcatcggcaggggtcacaattacctttagacgtggtttta
acccacttgaagccaattttagaaagtcctgatgcccccaaagttttacaaaatgccaaa
tttgaccgcaatattttcttagtacagggaattgccctccaaggggtggtttttgatacc
ctccttgccagttatgtactcgacccggaagggagtcataaattagcagatttgggcgaa
aaatatctggggatcacctcccaatcctatcaggatttagtccccaaggggcagaccatg
gcggatgtggcgattcccttagttgctaactattgtggaatggatgtatatgtaaccttt
cagttaatgagtattcttagaaatgaactggcaaaaattcctgaactggaacgagttttt
actgagatcgaactgcctttagaaccggttttagccgctatggaatatcggggcattacc
ttggacttagatttcttaaaacagctttctaaggaatttgaccaagccctccagcacatt
gaatcccaagcccatgcgttggtgggtcaacctattaacttaaattctcccaaacagtta
ggggtgcttctgtttgaaaccttagggctagataaaaaaaagacccgcaagacccaatcg
ggttacgctacggatgcggctactttggaaaaactcaagggggaacatccggtcattgat
ttaattttggaacatcgcaccttagctaaactcaaatctacttatgtggatgctttggcg
gaattatgccgaccagatacggggcgagtccatacggattttaatcaaacggttgccgcc
accggtcgtttatcgtcctctaatcccaacttacaaaacattcccattcgcacgaaaatt
ggccgacaaattcggcgggcatttatcccccagtctaactggcttttggtttcagcggat
tactcccaaattgaattgcgaattttagcccatctaagccaagaaccagtactgattacc
gcctttcaacggcaggatgacatccaccgactgactgcccaattactcctagagaaagaa
gagattacccctgatgaacggcggctcgctaagattatcaactatggggtgatttatggc
atgggaccccagcgttttatgcgggaagcaggggtttcatttgccgaagcgaaagcattc
attgagcgatttaatcaacgttatcccgccgtatttgattacttacaaaataccgaacgc
caggcaattgtccagggctatgtggcaactattacggggcggcgcaggtatttccggttt
accagtcccttactgcaacaattgcggggtaaaacattaaccgaagtggattgggaaacg
gtacaaaaacggttaaatcccgtagatgcgggtttattacgagcggcggccaatgcaccc
attcaaggttccagtgcggatattataaaaattgctatgattcgcatccatcaattatta
gctaactatcaagcccatttacttttacaagttcacgatgaattagtatttgaaatcccc
ccgtctgaatggccggaattagagccacaaatcaaacacattatgtcccaagcgatgact
ttagccgttcctttggaagtagatattcatagcggttctaattggcaagaggctaagtag
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