Gloeomargaritales cyanobacterium VI4D9: LQF76_03125
Help
Entry
LQF76_03125 CDS
T08937
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gcy
Gloeomargaritales cyanobacterium VI4D9
Pathway
gcy03030
DNA replication
gcy03430
Mismatch repair
gcy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LQF76_03125
03430 Mismatch repair
LQF76_03125
03440 Homologous recombination
LQF76_03125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gcy03032
]
LQF76_03125
03400 DNA repair and recombination proteins [BR:
gcy03400
]
LQF76_03125
Enzymes [BR:
gcy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LQF76_03125
DNA replication proteins [BR:
gcy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LQF76_03125
DNA repair and recombination proteins [BR:
gcy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LQF76_03125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DnaA_N-like_STI
DNA_pol3_gamma3
AAA_22
AAA_30
RuvB_N
AAA_19
AAA_5
AAA_16
ResIII
AAA_28
AAA_14
AAA_18
DEAD
PIF1
AAA_24
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
WAS05901
LinkDB
All DBs
Position
671682..673661
Genome browser
AA seq
659 aa
AA seq
DB search
MYIPLHHKYRPQTFQQLVGQAVIATTLSNGVRTGRIAPAYMFTGPRGTGKTSSARILAKA
LNCQSTDKPTPEPCGVCALCQAITQGNALDIIEIDAASHTGVDNVREMIEKAQFAPVQAR
YKVFIIDECHMLSGAAFNALLKTLEEPPERVVFVLATTDPQRVPATIISRCQRFDFRRIA
QADMEAHLRQIAEQEGIAITPAALTLVAQLAQGGMRDAESLLDQLSLLPPPIQPEQVWQL
AGRVPERDLWELVQGIYTEPLMAVLQRGRALLERGWEPLPLYQQLVGFVRDGLIALTAPT
ERHLTTLMPDTWQAWQTLGERVTATDLLHAQEYLRQSEPQLRHTTQPHLWLEVTLLGWWH
LWQEKTASATPAPASAINSSSIAKASPAPASHSSTPAITSSTPAINSSEPAIPSPTSANN
SSLIAKTSPAPAIPSSPLPTPPPTPVVKSSQPAITSSSSTIDSSPAATTSPSSEVRSPSQ
ANPSVKPAVNSSPTATGTTLETQDLATLWAQVVAHIKKPPARSLFQEASLVKLANQHAEI
ALKTPALLRNAEGKIKEVQAAFQKVLAQPITITLTVPKGNAPPISDPPVSNTVSHSSNNN
SNNNAHHVSVQAPVPATPPERPSLPAMPSEDGVMVAARRLADFFQGEVIVPVAEEGEDF
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
gtgtacattcccttacatcacaaatatcgcccccagacctttcagcaattggtgggtcag
gcggtcatcgccaccaccctgagtaacggggtacgcacgggacggattgccccagcctat
atgttcacgggtcccagggggacggggaaaacctcctccgcccggattctcgccaaggca
ttgaactgccaaagtacggacaaacccaccccggagccttgcggggtctgcgctctctgc
caagccattacccaagggaatgccctggacatcatcgagattgatgccgccagccatacg
ggggtggacaatgtgcgggagatgattgaaaaagcccagtttgcccccgtccaagcccgg
tacaaagtctttatcattgacgaatgccatatgctctccggggcggcgtttaatgccctg
ttgaaaaccctggaagaaccgccggagcgggtggtgtttgtcctggcgacgaccgacccc
caacgggtgcccgctacgattatttcccggtgtcagcggtttgattttcgccgcattgcc
caggcggacatggaagctcatttgcggcagattgccgagcaggaggggattgcgattacc
ccggcggcgttgaccttggtggcgcagttggcacagggggggatgcgggatgcggaaagc
ctgctggatcaactgagtttactgcccccgccgattcagccggaacaggtatggcagttg
gcgggacgggtgccggaacgggatttgtgggaactggtgcagggaatttataccgaacct
ttgatggcggtgttgcaacgggggcgggcactgctggaacggggctgggaacccctgcca
ctgtaccaacaattagtggggtttgtccgggatgggttgatcgccctcactgccccgacg
gaacggcatttaacgaccctcatgcccgatacctggcaggcttggcagaccttgggggaa
cgggtgacggcgacggatttgctccacgcccaggagtatttgcgccaaagcgaaccccag
cttcgccatacgacccagccccacctgtggttggaggtgacgttgttgggatggtggcat
ctgtggcaggagaaaaccgcctcggcaacacctgcgcctgcttcagcaataaattcatct
tcaatagctaaggcatcacctgctccggcaagtcattcatctaccccggcaatcacttca
tctactccggcgattaattcatctgaaccggcaataccttcgcctacttcggcaaataat
tcatctctaatcgctaagacttcacctgctccggcaatcccttcatcacccttgccaacg
ccgccgcctactccggtcgttaaatcatcgcaacccgcaataacttcctccagttcaaca
attgattcatctccagcggcaacaacttcgcctagttctgaggtgagatcaccatctcag
gcaaacccttcagttaaaccagcagtaaattcatccccaacggcaacagggactacttta
gaaacccaggatttagccaccctttgggcacaggtggtagcacatatcaaaaaaccgccc
gcccgttccctatttcaagaagcgagcctggtgaaattagcaaaccaacacgctgaaatt
gccctcaaaaccccagccttactgcgaaatgccgagggaaaaatcaaggaggtgcaggcg
gctttccagaaggtgcttgcccaacccatcaccattacgctgacggtacccaagggaaac
gctcctcccataagcgatccgccggttagcaatacggttagtcatagcagtaataataat
agtaataacaatgcccatcatgtctcagttcaggcaccggttccagccacgcccccagaa
cgcccgtctttacctgccatgcccagcgaggacggggtgatggttgccgcccgccggttg
gccgactttttccagggggaggtgattgtgcctgttgcggaggaaggcgaggatttctaa
DBGET
integrated database retrieval system
