Gloeomargaritales cyanobacterium VI4D9: LQF76_04870
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Entry
LQF76_04870 CDS
T08937
Name
(GenBank) PAS domain S-box protein
Organism
gcy
Gloeomargaritales cyanobacterium VI4D9
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_9
EAL
PAS
GGDEF
PAS_4
PAS_8
GAF
PAS_11
GAF_2
CBS
DUF6916
GAF_3
SHOCT
Retrotrans_gag
DUF4287
RecO_N
Motif
Other DBs
NCBI-ProteinID:
WAS06224
LinkDB
All DBs
Position
1046400..1051571
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AA seq
1723 aa
AA seq
DB search
MGATSSEHPLILAAELSVTEGITAFLATESTWAVVGSQRHPQGIITARELLGAPAGARLG
ELVAPGTPLTLADLAQPAQLEAKVADRNYVLVVGEAGECLGVWVRQRWQKLQQGYQLWQS
QTIDILMNPRVVTVPPELPVAQVRDLLAQEADTWVMVAHPESPRYPLGWVDWSRLWEPGV
TVQEVMSPPRLLPATTTLYEAYPYRREWVLVTDAAGLVVGSLTPQDWERYGHPFALQQAV
ADLRQTVNQQAQQVQQLTTSLRRNQERFAALLRYCGDVILVVNSQGIITYCSPSVRTVLG
YALDDLLGQLFCVRIHPEERAEIEAHLTQAPSQTGLIQWEFRYQRRDGSWCDLEALGNPQ
YSDPNLRGMVLNLRDVGERKHTLHLLTQKHAELRGVFRALRDLYFRLDSQGYILDCLDTC
TEDQVGRWVGDVLPPTARVLLTEGLTQLHQGAELAQFRYSYGHQTWTARLVPLPQDQAIL
VVQEVTAQSQLEAALRAIVQMQNWLLAATAPQTVYDRILQSLGETVGVSRVYLFENHIGS
QGQVLTDCKAEWCAPGVTPEIDNPLLQNFDYVGMGFVRWLEVLSRGEAIYGAVAEFPPQE
QEFLAAQDILSILVVPLKAGETWYGFLGFDVCDQVRRWQETEVNLLMSVGTAVAQSLRQW
QMERAIQDSEEKYRQLLEASSDAIWVSDGETGRIVEVSPQAEVLMGHSRAQLLGRYQWEL
HPRAEQATMRQDFYHWVRRGGTGEQEVAAQVQRADGETIPVEITARVLTWRGRSLLRSAV
RDVRERLQWEATHRVLLEAMPLGIAILQKRRLGLVNPALCQMLGYGRTELESLSPQALVN
LVHRDDRQKLRQAYRRWQWEGVAVVPQELRVWHRDGILVYLECYGQPLRVAGGNAVHLTI
KDVTENRRMAQALNQSLEQFRLTFERSPAAMSITDVEGRFLRVNPAMCELLQYEAETLLA
QGCGNFIHPDDQERYATISAQLLRDEVPQITLELRLLPQPERTLYVQLSKVVIARNRDQE
PVLFLSQLVNVTERVLAQQSLRRSEARLKLAAQTAGMLVWEWDIRTDMTETNRYSTDPGL
HPPDEPLTLRLPGLSALQSVHPEDVPTALTLRQRYQRGEIDRAEHRHRILLPDGTCRWLQ
TTSQLIRDEAGQPLRVVGVSLDVTEQMNLLQAVQTSEERLRTVVEDQTELIYRAKATGEL
TFMNPAFCRYAGRSEAELLHQPFRHPFHPQDQEQFSQRVGALTPGTPTFTMECRTAQVPE
RWYEWTIRGFFDPQERLWEVQGIGRDITEKKLAEAQLLYEALHDPLTGLPNRSLFLDRLQ
QVLARYQRDNHLGFAVLFVDLDRFKVVNDSLGHQAGDKLLVTIAQRLRSVVRAGDTVARL
GGDEFAILLTPFAPEQVGNRLPELQRVIAQPLVIGGQTVTSHASIGVVLSHPHYQNPEEM
LRDADIAMYQAKNQGRACYVVFAPEMFIQVVDDRRWEGELRTALDQGQLEVYYQPILAGE
TPLGVEALVYWHHPERGQLPPEAFLPDAEATGLRVPLGWWVLTTAATQMVQEPVCQSLSL
SVQVCRYQLHQGNFLPQLQEVCATTGLPPHRLRLELTEQTVMLAHQERPELLRQLHRLGV
GLTVADFGANPASLGRLHRWPVTALKIAPSFVSQVEQQPHSQPLIQAILVLAENLGITPI
AAGVETPAQKAILQRLGCTALQGTAIMPPLSLDQLREYLIKTP
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atgggggcaacgtccagcgagcatcccttgattttggcggcagaactctcggtgaccgag
ggaatcacggcgtttttggcaaccgaatctacttgggcggtggtgggttcacaaaggcat
ccccagggcatcattaccgcccgggaactgctgggcgcacccgctggggcaaggctgggg
gaattggttgctcccggaaccccgttaactttggcagatttggcacaaccggcgcaattg
gaggcgaaagtcgcagaccggaattatgtattggtggtgggggaggcgggggaatgcctg
ggggtgtgggtgcggcaacggtggcagaaactccagcaaggctatcagctctggcaaagc
caaaccattgatatattgatgaacccccgggtggtcacggttcccccggaactgccggtg
gcgcaggtgcgggatttactcgcccaagaggcagatacctgggtgatggtggcgcacccc
gaaagcccccgttatcccctgggttgggtggactggagcaggttgtgggaaccgggagtc
acggtgcaggaggtgatgtccccgccccggctgttacccgcaaccacgaccctgtatgag
gcgtatccctaccgccgggaatgggtgttggtgacggatgcggcggggttggtggtgggt
tcgctcaccccccaggattgggagcgttatgggcatccttttgccctgcaacaggcggtg
gcggatttgcggcagacggtcaaccaacaggcacagcaggttcaacaactgaccacgagc
ctgcgccgaaatcaggagcggtttgcggcacttctgcgctattgcggggatgtgatcctg
gtggtcaatagccagggaatcattacttactgtagtccgtcggtgcgaacggtactgggc
tatgccctggatgacctgctggggcaattattttgcgtccgcatccacccggaggaacgg
gcagagattgaagctcatttgacccaagcccccagccaaaccggtttgatccaatgggaa
tttcgctatcaacggcgggatggcagttggtgcgacctggaggcactgggcaatccccaa
tactcagaccccaacctgcggggcatggtgctaaacctgcgggatgtgggggaacgcaag
cacaccctgcacctgctcacccaaaaacacgccgaactgcggggggtgttccgagccttg
cgggatttgtattttcgcttggacagccaagggtacatcctggactgcctggatacctgc
accgaagaccaggtggggcgatgggtgggggacgtgttaccgccaaccgcacgggttttg
ctaacagaggggctgacccaactgcaccagggggcggaattagcccaatttcgctacagc
tatgggcaccaaacctggacagcccgcttggttcccttaccccaggatcaggcgattttg
gtcgttcaggaggtgactgcccaaagtcaattggaggcggcactgcgggcgattgtgcag
atgcaaaattggttgctggcggcgacggctccccagaccgtctatgaccggattttgcag
agtctcggggaaaccgtgggggtatcccgggtgtatctttttgaaaatcatatcggttcc
caggggcaggtgttgacggattgcaaggcggaatggtgtgccccgggggtaacgcctgaa
atagacaatcccctcctgcaaaatttcgattatgtcgggatggggtttgtccgttggttg
gaggtgctgagccggggggaggcaatttacggggcggtggcggagtttcccccccaggag
caggagtttttggcggcgcaggatattctcagcattttggtcgtacctctgaaggcgggg
gagacctggtacgggtttctggggtttgatgtctgtgaccaggtgcggcggtggcaggaa
accgaggtgaatttactgatgtcggtggggacggcggtggcgcagagcctgcggcaatgg
cagatggagcgggcaatccaggattcggaagaaaaataccgccagttgttggaagcctcc
agcgatgccatctgggtcagcgatggggaaaccgggcgaattgtggaggtgagtccccag
gcggaggttttgatggggcacagccgggcgcagttgctcggtcgttatcagtgggaattg
caccccagggcggaacaggcgaccatgcgtcaggatttttaccactgggtgcggcggggt
ggcaccggggaacaggaggtggcggcgcaggtgcaacgggcggatggggaaacgattccg
gtggaaattaccgcccgggtcttgacttggcggggacgttccctgctgcggagtgcggtg
cgggatgtacgggagcggttgcagtgggaggcgacccaccgggttttgctggaagccatg
cccctggggattgccatcctccaaaaacgtaggttggggttggtgaatccagccctgtgc
caaatgctgggctacggtcgcacggagttggaaagtttgtctccccaggcgttggtgaat
ttggtgcatcgggacgaccggcagaaattgcgccaagcctaccggcgctggcaatgggag
ggcgtggcggtggtgccccaggaattgcgggtctggcatcgggatggcattttggtttac
ctggaatgctacgggcaacccctgagagtcgccgggggcaatgccgtgcatttaaccatc
aaggatgtgaccgaaaaccggcggatggcgcaggcgttgaaccaaagtttggagcagttc
cgcctcacctttgaacgttccccagccgcgatgtccatcaccgatgtggaagggcgattt
ttgcgggtcaaccccgccatgtgtgaattattgcagtatgaagcggaaaccctgctcgcc
caggggtgtgggaactttatccacccggatgaccaggagcgatacgcaacgattagtgcc
caattgctacgggatgaggtgccccaaattaccctggaattgcgcctgcttccccaaccg
gagcggacgttgtatgtgcagttgagcaaggtggtgattgcccgcaatcgggatcaagaa
cccgtgctgttcctctcccagttggtgaatgtgacggaacgggtgctggcgcaacagtcc
ctgcggcgcagtgaagcccgtctcaaattagccgcccagaccgctgggatgttggtgtgg
gaatgggatattcggacagacatgaccgagaccaaccgctacagtactgacccgggtctc
catccccccgatgaacccctcaccctgcgtttacccggtctgagtgccttgcaaagtgtg
cacccggaggatgtgcccaccgccctcaccctgcgccaacgctaccaacggggggagatt
gaccgggcggaacaccggcaccggattttgctccccgatggcacctgccgttggctccaa
accactagccaattgatccgggacgaagcggggcaacccctgcgggtggtgggggtctcc
ctggatgtgaccgagcagatgaatttgctccaggcggtgcagaccagcgaagaacggctc
cgcacggtggtggaagaccaaaccgaattgatctaccgggcgaaggctaccggggaattg
acgtttatgaatccggctttttgccgctatgcgggtcgctcggaggcggaattgctccat
caaccttttcgccatcccttccatccccaggatcaggagcagtttagccagcgggtgggg
gcacttactcccggtacccccacctttacgatggaatgccgtaccgcccaggtgccggaa
cggtggtacgaatggacgatccgggggttttttgacccgcaggaacgcctctgggaggtg
caggggattgggcgggacattacggagaaaaaattggcggaggcgcaactcctctacgaa
gccctccacgaccccctgacgggtctgcccaaccgcagtctgtttttagaccgtctgcaa
caggtgttggcgcgctatcaacgggataaccaccttggttttgcggtgttgtttgtggat
ttggaccggtttaaggtggtcaatgacagcctggggcatcaggcgggggataaactcttg
gtgaccattgcccaacggctacggtcggtcgtgcgggcgggggatacggtagcgcggctg
gggggggatgaatttgccattttactcaccccctttgccccggaacaggtcgggaaccgc
ctgcccgaactccaacgggtgatcgcccaaccactggtgatcgggggacaaactgtcacg
tcccacgccagcattggggtggtgctgagccatccccattatcaaaacccggaagaaatg
ctcagggatgcggacatcgccatgtaccaggcgaaaaaccaggggcgagcctgctatgtg
gtctttgccccggagatgtttatccaggtggtggacgaccggcgctgggaaggggaactc
cgcactgccctcgatcaagggcaactggaggtctattaccagcccattctcgccggggaa
acgcccttgggagtagaagccctggtgtattggcatcatcccgaacggggacaactgcca
cccgaagccttcctgcctgatgcggaagccaccggcttgcgggtgcccctgggctggtgg
gttttgaccacggcggcgacccagatggtgcaagagccggtatgccagtccttgtccttg
agcgtccaggtgtgtcggtatcagttgcaccaggggaattttttgccccaactgcaggag
gtatgcgccaccaccggactgccaccccaccgcctgcggttggaactcacggaacagacg
gtcatgctggcgcaccaggaacgcccagaattgctccggcaactgcaccgcctgggggtg
ggactgaccgtggcggattttggtgccaaccctgcctccctgggtcgcctacatcgctgg
ccggtcaccgccctgaaaattgccccctcctttgtcagccaagtggaacagcaaccccat
tcccagcccctcatccaggcgatccttgtcctggcagaaaacctgggcatcacccccatt
gccgccggggtggaaacgcccgcccaaaaagccatcctgcaacggctgggctgtacagca
ctccagggcactgcgatcatgccgcccctctccctggaccaactgcgggaatatctcatc
aaaaccccataa
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