KEGG   Gloeomargaritales cyanobacterium VI4D9: LQF76_05160
Entry
LQF76_05160       CDS       T08937                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification system endonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
gcy  Gloeomargaritales cyanobacterium VI4D9
Brite
KEGG Orthology (KO) [BR:gcy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gcy02048]
    LQF76_05160 (hsdR)
Enzymes [BR:gcy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     LQF76_05160 (hsdR)
Prokaryotic defense system [BR:gcy02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   LQF76_05160 (hsdR)
SSDB
Motif
Pfam: EcoEI_R_C ResIII SWI2_SNF2 DEAD HSDR_N DUF4145 Helicase_C PhoH RED_N SLFN-g3_helicase
Other DBs
NCBI-ProteinID: WAS06276
LinkDB
Position
1112501..1115866
AA seq 1121 aa
MHSPNFHFLASHDEQLVRLGALAERYFQEDPNTCIIKLRQFAELLAQLTAAKTGLFISTE
ENQADLLRRLKFERVITEQVADLFHQIRIVGNKATHQCTGSHREALTQLKIARNLGIWFH
QTFSGDRNFKAGAFVPPPKPADANADLTAELERLRNELEKTRSEAEKARQAAEDQAKALL
SAEEKAQREAEERALWEQLAIEAEQARSALQAQLTSMQSATQQTALVINMSEQAAFSIDL
DEDETRAIIDQQLRDAGWEADTQNLRYSKGARPAKGRNMAIAEWQTTNGIADYALFVGMR
CIGIIEAKRRQKNVSTAIDQAERYAKGFQLQDGVGLVDGSPWGEFYVPFVFATNGRPYLK
QIETESGIWFRDVRKPTNRRRALAGWLTPEGLQAQLDMDRETAHTALKNQPYEFGFPLRP
YQQRAIAAVENALEQDRREMLVAMATGTGKTKLAIALLYRLLTAKRFRRVCFVVDRNALG
TQTADQFRTTKIVSTKTFADIFGLQSLKDIEPESETKVHICTIQGLVKRVLYASEPSDIP
PVDQYDLLLVDECHRGYLLDREMSDSELSFRSQDDYISKYRRVLEYFDAVKIGLTATPAL
HTVEIFGEPVFTYSYREAVIDGFLIDHEPPVQITTSLSQSGINFRVGEALDVIYSPTGHL
QRIYAPDNLNFDVDDFNKRVITVPFNQAVAQELAKHIDPNLPGKTLIFAVNDAHADIVVD
QIKQAMEDYYGEIEDGAVRKITGSVDRVSELIRSYRNDSLPKIAVTVDLLTTGIDVPSIT
NLVFLRRVNSRILYEQMLGRATRPCPEIEKETFRIFDAVDLYGKLQNLTEMKPVAVNPSI
SFAQLFDELVGVTEDKQRGEIRDQIIVKLRRKLKQLSAQIREQYEAHCGELPEQTLERFR
TAPLEELVDWIRNHPQIGQILDWRSDDGQGRWIPISHHPDEVVAVNSGYGTGQKPNDFLD
SFANYVRNNLNKIVALTVVVQRPRELTRAQLRELRLELDRMGYSETNLRRAWQETQNEDI
AASIVGFIRQAALGDPLVPYEERVRNAMKRILAKRAWTEPQRKWLQRIGEQVVRELVVDR
SVLDQEPFQKDGGFNRLNRIFDGQLEAILGEINEELWRTTA
NT seq 3366 nt   +upstreamnt  +downstreamnt
atgcactcaccaaattttcatttcttggcatcccatgatgaacagcttgttcgtctcggt
gctttggctgaacgctatttccaagaagaccccaacacttgcataattaaattacgacag
tttgctgaacttttagcccaattgactgctgccaagacggggctatttatctccactgaa
gagaaccaagcggatttattgagaagattaaaatttgaacgagtgataacagagcaggta
gccgatctatttcaccaaatcaggattgtagggaacaaagcaacccatcaatgtacaggt
agccatagggaagccctaactcaattaaaaatcgcccgcaatctaggcatctggtttcac
cagacattcagtggagatagaaatttcaaggcaggggcttttgtgcctccaccgaaaccc
gctgatgcaaacgcagacctgaccgccgaactggaacggttacggaacgaattggaaaag
acccgtagtgaggcagaaaaagctagacaagccgccgaagaccaagcaaaagccttacta
agtgccgaagagaaagcccagcgagaagcagaagaacgagctttatgggagcagttggcg
atcgaggcagaacaggcaagatcagctctacaagctcagctaaccagtatgcaatccgct
actcagcaaaccgcccttgttatcaatatgtccgaacaagcggcattcagtattgaccta
gatgaagatgaaaccagagcaattatcgatcagcagttgcgagatgcgggttgggaggct
gacacccaaaacttacgctacagcaaaggggctagacctgcaaaaggaaggaacatggcg
atcgctgaatggcaaaccacaaatggtatcgctgattatgccttgtttgtaggtatgcgc
tgtattggaataatagaagccaaacgcagacagaaaaatgtttctacagcgatcgaccaa
gcggagaggtatgccaaaggctttcagcttcaagatggagtagggttagtcgatggcagt
ccgtggggtgaattttatgttccttttgtatttgctaccaatgggcgaccctacctaaaa
caaattgaaacagagagcggcatctggtttcgggatgtgcgtaaaccgaccaaccgccgc
cgtgccttggctggatggctcactccagaaggattgcaggcacaattagatatggatcgg
gagactgcccatacagccctgaaaaaccagccttatgaatttggatttcccctgcgaccc
tatcagcaacgggcgatcgccgctgtagaaaatgccctagagcaggatcggcgagaaatg
ttggtagcaatggcaacggggactggtaaaactaaactagcgatcgctctgctctaccgt
cttttgaccgccaaacgatttcgccgagtttgctttgtggtcgatcgtaatgctttggga
acacagacagcagatcaatttcgcactactaaaattgtgtcaaccaaaacctttgctgat
atttttggattgcagagcttaaaagatattgaaccagagtcagaaacaaaagtacatatc
tgcaccattcaaggactggtgaagcgagtgttatatgccagtgaacccagtgatattccc
ccagtcgatcagtacgatttgctgttggtggatgaatgtcatcggggctatctactcgat
cgggaaatgtctgatagtgaactcagtttccgcagtcaggatgactacatttccaaatat
cgccgggttttggaatactttgatgctgtgaaaattgggctgacggcgacacctgccctg
catacggtggagatttttggcgaacccgtgtttacttactcctatcgggaggcagtgatt
gatggctttctcattgaccatgaaccccctgtgcagattactacttccctcagtcagagt
ggtattaactttcgggttggagaagcattggatgtcatttattcccccactgggcattta
caacgcatctatgccccagacaatctaaattttgatgtagatgattttaataaaagagtg
ataaccgttccgtttaatcaggcggtagcccaagaattagcaaaacatattgatccaaat
ttgcctggcaaaaccctgatttttgcggtgaatgatgcccatgcagatatagtagttgac
caaatcaaacaagcaatggaagactactacggtgaaattgaggatggtgctgttcgcaaa
attacgggtagcgtcgatcgagtcagtgaattgatccgctcctatcgtaatgattcactg
ccgaaaattgcagttacggttgatctgctgaccacagggattgatgtgccaagcattacc
aatctagtgtttttgcggcgggtgaatagtcgcattttgtatgagcagatgttggggcgg
gctactcgtccctgtcctgagattgagaaagagacctttcggatttttgatgctgttgat
ttgtatggcaaactccaaaatctaacggaaatgaaacccgttgctgtcaatccatctatc
tcatttgcccagttgtttgatgaattagtaggggtgactgaagataaacagcggggtgaa
attagagaccaaattattgtcaagctaagacggaagctaaagcaattgtctgctcagatt
agggaacagtatgaggcgcattgcggtgaactccctgaacagactttggagaggttcaga
actgccccactggaagagttagtagattggataagaaaccatccacaaattgggcagatt
ttggattggcgttcagatgatggacagggaagatggatacctatttcccatcaccctgat
gaagtggttgccgtgaacagtggctatggcactgggcaaaaaccgaatgattttctggat
agctttgcaaactatgtcaggaataatctgaataaaattgtggctttgaccgtagtggta
cagcgaccaagagagctaacccgtgcccaattgcgggaattgcgcctagaacttgatagg
atgggctactcagagacaaatttgcgtagggcatggcaggagacccaaaatgaagatatt
gcggcttcaatcgtgggtttcatccgtcaggcggcgttgggcgaccccctagttccctat
gaggaacgggtcagaaatgctatgaagcgcatactggcaaagcgggcatggacagaacct
caacggaaatggttgcagagaattggggaacaggtggtgcgggaattggtggttgatcgc
tcagtcctagatcaggaaccgttccagaaggacgggggatttaaccgcctcaaccgcatt
tttgatgggcagttggaagcaattttaggagaaattaacgaggaattatggcgaacaaca
gcgtaa

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