Gloeomargaritales cyanobacterium VI4D9: LQF76_06060
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Entry
LQF76_06060 CDS
T08937
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
gcy
Gloeomargaritales cyanobacterium VI4D9
Pathway
gcy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LQF76_06060 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gcy03400
]
LQF76_06060 (uvrC)
DNA repair and recombination proteins [BR:
gcy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LQF76_06060 (uvrC)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_2
GIY-YIG
HHH_5
UVR
HHH
HHH_3
HHH_8
GIY_YIG_domain
Motif
Other DBs
NCBI-ProteinID:
WAS06442
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Position
1296438..1298312
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AA seq
624 aa
AA seq
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MTESPLIHQPERLQQRLAEAPLEPGVYFFKDRQDNILYIGKSKRLRSRLQSYFRNDQRLS
PRIALMVQHISEIEFIVTDTETEALILEANLIKQHQPHYNILLKDDKTYPYVCITWSEDY
PRIFITRKRRFTHPKDRYYGPYVDTFQLRQTLGLMYRLFPLRQRPKPLFPDRPCLNYQIG
RCPGVCQKLISPEEYHQTVAQVAMIFQGRTEELLAKLSQKMHTFAQEMNFEAAAQVRDQM
RRLAGLGEQPKVNLPDEHAILDAVALAMDDQYVCIQLFQMRAGRLVGQLGFFTQRQGDEP
GAIIQRVLEEHYTQVEGVEIPPLILVQYDLPEGELLSHFLSEKRQGKVKIHTPQRLQKAE
LINMVMRNAELELNRRQRAIEANLFALNDLAELLNLPDIPHRMEAYDISHLQGTNVVASR
VVFIDGQPAKQHYRHYNIKNPQVEPGHSDDFASMAEVISRRFAPWMRDPERATLGDADWP
DLVVIDGGKGQLSAAMKMLKPWPFAEHLTVIALAKKQEEVYLPGNRTPVVSEPEQPGMQL
LRRLRDEAHRFALKFHRQQRSRRQRYSTLAQIPGLGHQRQQQLFAYFHSLDMIQAATAEQ
LAQVPGIGPRLAQQIYEYFHPQAG
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatcccccctcattcaccagccggaacgactgcaacaacgcctagcggaagct
cccttagaaccgggggtttattttttcaaagaccgtcaggataacattttgtatattggt
aaatccaagcggttacgcagtcgtttacagtcctattttcgcaatgatcagcggctcagt
ccccgcattgctttgatggtgcaacatatcagcgaaattgaatttattgtcaccgatacg
gaaacggaagccttaattttagaagccaatttaattaaacagcatcagccccattacaat
atcctgctcaaggatgacaaaacctatccctatgtatgtattacttggtcggaggattat
ccccgcatttttatcacccgtaaacggcgatttacccatcccaaagaccgctattatggc
ccctatgtggatacgtttcaattacgccaaaccttggggttgatgtaccgattatttccc
ctgcggcaacgcccgaaacccctatttccagaccgcccctgtttgaactatcaaattggt
cgctgtccgggggtctgccaaaaattgatcagcccggaagagtaccatcaaacggtggca
caagttgcgatgatttttcagggtcgcacggaggaattgctggcgaaactttcccaaaaa
atgcacacctttgcccaggaaatgaattttgaagcggcggcacaggtgcgggatcaaatg
cggcgtttggcaggattgggggagcaacccaaggtgaatttgcctgatgaacacgccatt
ttagatgcggttgccctggcgatggatgaccaatatgtgtgcattcaactgtttcaaatg
cgggcgggtcggttggtgggacaattgggcttttttacccaacggcagggggatgaaccg
ggggcaatcattcaacgggttttagaagaacattatacccaagtggaaggggtagaaatt
ccccctttaattctggtgcaatatgatttgccggagggggaattactcagtcattttttg
agcgagaaacggcaaggtaaagtaaaaattcataccccccaacgtctgcaaaaagcggaa
ctcattaacatggtgatgcggaatgcggaattggaactcaatcgccgtcaacgagccata
gaagccaatttatttgcccttaatgatttagcagaattattaaatttacccgacattccc
caccgcatggaagcctacgatatttcccatctccagggtacaaatgtggtggcttcccgg
gtggtttttattgatggtcaacccgccaaacaacattaccgccattacaacattaaaaat
ccccaggtggagccgggacacagtgatgattttgccagcatggcggaggtaatttcccgc
cgttttgctccttggatgcgtgacccggaacgggcaactttgggggatgcggattggccg
gatttggtggtaattgacgggggcaaaggtcaattgtcggcggcgatgaagatgctcaag
ccctggccctttgcggaacatttaacggtaattgcgctggcgaaaaaacaggaggaagtg
tatctcccaggcaaccgcacccctgtggtcagcgagccggagcaaccggggatgcaactc
ctgcggcggttacgggatgaggcgcaccgatttgccctcaaattccatcggcaacagcgt
tcccgtcgtcagcgttactccaccctggcgcagattcccggcttggggcaccagcggcaa
caacaattatttgcctattttcattcgttggatatgattcaagccgccaccgccgagcag
ttagcccaggtgccggggattggcccccgcctcgcccaacaaatctacgaatacttccat
ccccaggcgggctag
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