Gloeomargaritales cyanobacterium VI4D9: LQF76_06195
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Entry
LQF76_06195 CDS
T08937
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gcy
Gloeomargaritales cyanobacterium VI4D9
Pathway
gcy00061
Fatty acid biosynthesis
gcy00071
Fatty acid degradation
gcy01100
Metabolic pathways
gcy01212
Fatty acid metabolism
gcy02024
Quorum sensing
gcy04146
Peroxisome
Module
gcy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gcy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LQF76_06195
00071 Fatty acid degradation
LQF76_06195
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LQF76_06195
09145 Cellular community - prokaryotes
02024 Quorum sensing
LQF76_06195
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gcy01004
]
LQF76_06195
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gcy04147
]
LQF76_06195
Enzymes [BR:
gcy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LQF76_06195
Lipid biosynthesis proteins [BR:
gcy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LQF76_06195
Exosome [BR:
gcy04147
]
Exosomal proteins
Exosomal proteins of breast milk
LQF76_06195
Exosomal proteins of breast cancer cells
LQF76_06195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WAS06467
LinkDB
All DBs
Position
complement(1324433..1326301)
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AA seq
622 aa
AA seq
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MSPWSALPDLWPELAQKFPTHIALEEPHRQPPVRLTYGELAQQIQGFAQGLQALGLQPGE
RVALFADNSSRWMIADQGIMRAGGVDVVRGAQAPLEELDFIYRNSESSFLVVDTPDLLKR
LAGYLGAWQPRAVIVLWGEGADGLSFDQVMQRGEQWEFKPPHLEPESLATLLYTSGTTGK
PKGVMLSHGNLLHQVQNLHVVFTPQPGNIALSLLPTWHTYGRSGEYFLLSQGIHQIYSTL
RHFKQDLTKYKPHHIVGVPRMWESIYEGVEREFRQQPPGKQKLIWGLIGISKRYITGKRL
WQGLTLEPVAPSPLQRLGGGLVALCLWPLHRLGDALVYRKVRQAVGGRLKEGASGGGALA
RYLDDFYELAGLTILVGYGLTETSPVLTARWVTRNLRYSAGLPLPGTEIKVVDPETRQPL
PATHKGLVLARGPQLMKGYYRNPEATAKVVDDQGWFDTGDLGWVTPKGDLVLTGRAKDTI
VLSSGENIEPQPIEDACLQSPYISQIILVGQDARQLGCLIVPNETALKAWAQAQGHTLTM
PQEEPVPGAWTLDTPEVLELYRVELKTHSQNRPSVRPFEQIGPFRLLAEPFTIENGLMTQ
TLKIKRNQVMERYQDVIQEMFK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtctccctggtctgccttgcccgacctctggccggaactggcgcaaaagttccccacc
cacattgccctggaagaaccccaccgccaaccccccgtgcggcttacctatggggagttg
gcccaacagattcaggggtttgcccaagggttacaagccctgggactgcaaccgggggaa
cgggtggctttgtttgcggacaacagctcccgctggatgattgcggatcaggggattatg
cgcgccgggggggtggatgtggtgcggggggcgcaggcacccctggaggaattggatttt
atctaccgcaacagtgaaagcagttttttggtggtggataccccggatttgctcaaacgg
ctggctggctatctgggggcatggcaaccccgggcggtaatcgtcctctggggtgagggg
gcggacggcttgagttttgaccaggtgatgcaacggggggaacaatgggaatttaagccc
ccccacctggaacccgagtctttggcgaccctgctgtacacttcgggcacgacgggcaaa
cccaagggggtgatgctcagccacggcaatctattacatcaggtgcaaaatctccacgtg
gtctttacgccacaaccggggaatattgccctgagtttgcttcccacctggcacacctac
gggcgttccggggaatattttttgctctcccaggggattcaccagatttatagcaccctg
cggcatttcaagcaggatttgaccaagtataaaccccaccacattgtcggggtaccccgg
atgtgggagtccatttacgagggggtcgagcgggaatttcggcaacagccccctggcaaa
caaaagctgatttggggtttgattggcatcagcaaacgctacatcaccggcaaacggctc
tggcaagggttgaccctggaaccggtggcacccagtcccctgcaacggttggggggtggg
ttggtggcgctgtgcctttggccgctacatcgcctgggggatgcgctggtgtatcggaag
gtccggcaggcggtggggggacggctcaaggagggggcgagtggcggcggtgccctggct
cggtatttggatgatttttacgaattggcggggctgaccatcctggtgggctatggtttg
acggaaacctccccagtgttgaccgcccgctgggtgactcgaaatttgcgctattccgcc
ggactgcccctgcctgggaccgagatcaaagtcgttgacccggaaacccgccaaccgctt
cccgctacccacaagggtctggtgttggcccggggaccgcagttgatgaagggctactac
cgcaacccggaggcgacggccaaggtggtggatgaccagggctggtttgatacgggggat
ttgggttgggtcacgcccaagggggacttggtgctgactgggcgggcaaaggacaccatc
gtgctcagtagcggtgaaaatattgaaccccagccgattgaggatgcttgtttacaaagt
ccatacattagccagattattttggtggggcaagatgcccggcaattggggtgcctgatt
gttcccaatgaaaccgcactcaaggcttgggcgcaggcgcagggacacacgctcaccatg
ccccaggaggaaccggtaccgggagcctggactttggatacgccggaggttttggaactt
taccgggtggaattgaaaacccattcccagaaccgtccgagtgtgcgaccctttgagcag
attgggccctttcggttgcttgcagaaccgtttacgatagaaaatgggctaatgacgcag
accttaaaaattaaacgcaatcaggtgatggaacggtatcaggacgtgattcaagaaatg
tttaagtag
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