Gloeomargaritales cyanobacterium VI4D9: LQF76_08175
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Entry
LQF76_08175 CDS
T08937
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
gcy
Gloeomargaritales cyanobacterium VI4D9
Brite
KEGG Orthology (KO) [BR:
gcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gcy03400
]
LQF76_08175
Enzymes [BR:
gcy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LQF76_08175
DNA repair and recombination proteins [BR:
gcy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LQF76_08175
Prokaryotic type
LQF76_08175
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WAS04012
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Position
1759187..1760761
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AA seq
524 aa
AA seq
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MQKIHCAWFRRDLRLRDNEMLWRASAGDVLPFFIVDPWFYQQPELSHQRVNFLWESLAEL
AQAIQQRGGKLLLFHGDSVTIVRQLTQELLAQNYIPHLLFNRDIQVIYGLERDQKIIQLY
QDQNLPVTPCTNYYLSPAGHGDNWLEEYYHYQNQPLHPIPERIYTPDICLKTPQISLTDF
KQNYGINHIKNPWFTGGESVAQSTLNTFLAGRFHGYHWKISRPWLAQQKATSHLSPHLTF
GTISGREVYQKVQKKRQEYPDHDRAVLSLRAFRDRLRWRDSASQRLYDQPNLVHQNVYPE
FDEWYNYKPLTPEQQMYFSRWQHGMTGFPLVDASMRQLQQMGWMNFRMRAMCATFLTINC
GISWHYGAQHYMQHLIDGDLAIDHWQWQMQAGITNPLSSSFRIYNPERNARERDQNWQFI
HYWVPELRGIQPQDWGKVIVHSYPQPMLDWAETRRQHGAIIQGLRERVRQRLYREQGQEL
TIAQQAQNTLKRYHQRWCQYYRQAASHHGQQLSLDLGDLHSSMN
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaattcattgtgcgtggtttcgtcgggatttacggctgagggataatgaaatg
ctctggcgtgccagtgcgggtgatgttctacccttttttattgttgacccttggttctat
cagcaaccagaacttagccaccagcgggtaaattttttgtgggaatccctagcagaatta
gcacaggcgattcaacaacgagggggtaaactgttactatttcatggagatagtgtgact
attgtgcggcaattaactcaggaattgttagcccaaaattacattcctcacctacttttt
aatcgggatatacaggtcatctacggattagaacgggatcaaaaaattattcaactttac
caagaccagaatttgccagtcaccccatgtaccaattattacctatcccctgctggacat
ggcgacaattggctagaagaatactaccattaccaaaaccaacccttgcatcccattcct
gagcgtatttatacccctgatatatgcttaaaaactccccaaatttccctgaccgatttt
aagcaaaactatggcataaatcatattaaaaacccttggtttactgggggtgaatctgtg
gcgcaaagcaccctaaacacatttttagctggacgttttcatgggtatcattggaagatt
tcccgcccttggttagcgcaacaaaaagcgacatcccatttgtctccccatctgacgttt
ggtacgataagtgggcgagaagtgtatcaaaaagtgcaaaaaaaacgccaagaatatcca
gatcatgaccgagcagttttatccctgcgcgcatttcgggatcgcctgcgatggcgggat
tcagccagtcagcgactttatgatcagcccaatttggtgcatcaaaatgtctatccagaa
tttgacgaatggtataattacaagcctttaacaccagagcaacaaatgtattttagccgt
tggcaacatggcatgacgggattccccttagttgatgcgagtatgcgccaattacaacag
atgggctggatgaatttccggatgcgggcgatgtgtgccacgtttttaaccattaactgt
ggtatttcttggcattatggggcgcaacattatatgcaacatttgattgatggggattta
gccattgaccattggcagtggcaaatgcaagcgggaattaccaatcccttatccagcagt
tttcggatttacaacccggaacgtaatgcccgggagcgggatcaaaattggcagtttatt
cactattgggtgccggaattgcgtggaatacaaccccaagattgggggaaggtaatcgtc
cattcctatccccaaccgatgttagattgggcggaaacccgtcgtcaacatggggcaatc
attcaaggcctaagggagcgagtccgccagcggctttatcgggaacaggggcaggaattg
accatagcccagcaggcacaaaacacgctaaaacgttatcatcaacgttggtgtcaatac
tatcgacaggcggcgtcccatcacggtcaacaactatccctagatttaggtgatttacat
tcctcaatgaactaa
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