Gloeomargaritales cyanobacterium VI4D9: LQF76_08200
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Entry
LQF76_08200 CDS
T08937
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
gcy
Gloeomargaritales cyanobacterium VI4D9
Pathway
gcy00550
Peptidoglycan biosynthesis
gcy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gcy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LQF76_08200 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gcy01002
]
LQF76_08200 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gcy01011
]
LQF76_08200 (dacB)
Enzymes [BR:
gcy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LQF76_08200 (dacB)
Peptidases and inhibitors [BR:
gcy01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
LQF76_08200 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
gcy01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
LQF76_08200 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
WAS04017
LinkDB
All DBs
Position
1764162..1765640
Genome browser
AA seq
492 aa
AA seq
DB search
MFLANPPTPVQLCRTSLTNTLDQIRQQPEYQKAHWGILIQTQENPPRTLYDYQSQRFFLP
ASTIKLLTTAGAFVHLGGEHRLRTVFYQQGRQLHLVGQGDPTLTTVKLQQLAQKISPKQR
QTFDTVVIQTGYFQGPNFNDQWEWQDILNTDMVPINNLILNRNESQLQLVAQTPGKPARV
FWSDPDAGRYWQIINTTRSTTSPTQPVNIWIPPGLPQLHLRGDVTPQPLSFTVPILDTDQ
YLIQTLTRLFPGKKVVLRRTVLPANLGTEVAAVASVPVAQLVARINQASDNLYAEALLRH
LGAVSNPRMPSDLAGIQVVQKVLAGLGVSPGGVLQSDGSGLSRHNRVTPLALVQMLQGMA
VAHPSYANSLAVPGLPGTLRRRFTQTDIDLQAKTGTLSGVAALSGYLQPRNRPRLVFAIV
INLSEQPAASLRRGIDQMVMAVNDWAENSPPDQWGNCTQAAYGQGGSALLIPKYRSPYRG
WLRPAMLVTFDL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtttctcgccaatccacccacaccagtgcaattatgtcgcacgtctctgaccaataca
ctggatcaaatccgtcagcaaccggagtaccagaaagcgcactggggaattttgattcaa
acacaagaaaatccaccccgtactttgtatgattaccaaagccagcggttttttttaccc
gcttctacgataaaactcctgaccacggccggggcttttgtccatttggggggagagcat
cgtctgcgaacggtgttttatcaacaggggcggcagttgcatttagtaggacagggggat
ccgactttaacaacggttaaattgcaacaattggcgcaaaaaattagccccaaacaacgg
caaacgtttgatacggtggtgattcaaaccggttattttcaagggcctaattttaatgac
caatgggagtggcaggatattctcaatacggatatggtgccgattaataatttaattttg
aatcgtaatgagagtcagttgcaactggtggcacaaacccccggcaaaccggcacgggtt
ttttggtctgacccggatgcggggcgttactggcaaattatcaacactacccgcagtacc
actagtcccacacagccggtgaacatttggattccgccggggttaccccaattgcatctg
cggggggatgtgacccctcagcccctcagttttaccgtgcccattctagatacggatcag
tatcttatccagacattgacccggctgttccctggcaaaaaagtggtcttgcgacgaacg
gtactgccagccaatttggggacagaggtggcggcggtggcatcggtgccggtggcgcag
ctggtggctcggatcaatcaagccagtgataacctctatgcggaggctctgttgcggcat
ttgggggcggtcagcaatccccggatgcccagtgatttggcggggattcaggtggtacaa
aaagtgttagcgggtctgggggtcagccctgggggggtactccaaagtgatggctccggg
ttatcccgccacaaccgggttacgcccctggctttggtacagatgttgcagggaatggcg
gttgcccatcccagttacgctaactctttggcggttccgggactgccaggcaccctacgc
aggcggtttacccagacggacattgacctacaggcgaaaacaggtaccctatcgggggtt
gcggctctatcgggctatctacagccccgcaatcgtcccagattagtgtttgcgattgtg
atcaacctatcggaacaaccagcggcgagcctacggcggggcattgaccagatggtaatg
gcggtaaatgattgggcggaaaactcccctcctgaccaatggggaaattgtacccaggcc
gcctatgggcaggggggctcggcgttgctcatcccgaaatatcgcagtccttaccgagga
tggctacgccctgccatgctggtcacatttgatttatga
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