Gloeomargaritales cyanobacterium VI4D9: LQF76_08870
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Entry
LQF76_08870 CDS
T08937
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
gcy
Gloeomargaritales cyanobacterium VI4D9
Brite
KEGG Orthology (KO) [BR:
gcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
gcy03110
]
LQF76_08870 (clpB)
Chaperones and folding catalysts [BR:
gcy03110
]
Heat shock proteins
HSP100
LQF76_08870 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Clp_N
AAA_22
AAA_16
Sigma54_activat
ATPase_2
nSTAND3
TniB
Mg_chelatase
IstB_IS21
AAA_14
RuvB_N
AAA_18
AAA_7
NACHT
NBD_SMAX1
RNA_helicase
TsaE
bpMoxR
ResIII
AAA_24
AAA_3
Zeta_toxin
AAA_25
Torsin
DNA_pol3_delta2
zf-C4H2
Motif
Other DBs
NCBI-ProteinID:
WAS04145
LinkDB
All DBs
Position
complement(1891926..1894547)
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AA seq
873 aa
AA seq
DB search
MQPTDPNKFTEKAWEAVVKSQDITRRYRQQQLEVEHLILALLEQNDFAAKMLEQAGCDLA
QCAQQVDTFARRQPQVNQGSGQLYLGRFLDLLLDRAEAYRLTWNDALISVEHFLLGFSED
ERLGRRLLQGLGVTTEQLITAIKAIRGNQRVQDASPESHYQALERYGRDLTEQARAGKLD
PVIGRDEEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNGDVPESLKNRRLI
SLDLGSLVAGARYRGDFEKRLQAVLREVTQAEGQIVLFVDELHTVVGAGATQGTMDASNL
LKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQPIRVEEPSLEDTVAILRGLKERYE
VHHGVKIADAALVSAVVLSIRYLPERFLPDKAIDLIDEAAAKLRMEITSKPEELEALDRR
LMQLQMERLSLLEDRDRISQERLRKIDQEINTLSAQQAELNQQWQGEKQILEAIKALKQE
EEQIRVQIEQAERNYDLNRAAQLKYGRLESLHQELEAKEAALSEIQARSSTLLREQVTEA
DVAEIVAKWTGIPVRRLLESERQKLLHLEQYLHQKVIGQEQAVKAVAAAIRRTRAGLKSP
RRPIGSFLFLGPTGVGKTELARTLAEALFDSEHALVRLDMSEYMEKQTISRLLGAPPGYV
GYEEGGQLSEAIRRRPYAVVLLDEIEKAHPDIFNILLQILDDGRVTDSQGRVVDFRNTII
VMTSNLGSELILEGTETPEFLEPKIRQLLATQFRPEFLNRIDETIIFHCLNREQLRQIVN
LQIAQLQQLLAEQNVTLEVTVAAQEYLVEVGYDPAYGARPLRRAIQRELENALADFILSQ
NQANPMQIMVDVQGGKLHLSPLCEPHLPVPARI
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
gtgcaacccactgacccgaataaatttaccgaaaaagcctgggaagcggtcgtcaaatcc
caggacatcacccgccgctatcggcaacaacaactggaagtcgagcatctcattttagcc
ctgctggaacagaacgattttgccgccaagatgctggagcaggcgggttgtgacctagcg
caatgtgcccaacaggtggatacctttgcccgtcgccaaccccaggtgaatcaggggagt
ggacagttgtatctggggcggtttttagacctactgctggatcgggcggaagcctatcgc
ttgacctggaatgatgccctgatttccgtcgagcatttcctgttggggtttagcgaggat
gaacgcctggggcgtcggttactccagggtttgggggtgaccaccgagcagttaatcact
gctatcaaagccatccggggcaaccaacgggtgcaggatgccagccccgaatcccattac
caagccctggaacgctatggtcgggatttgaccgaacaggcacgggcggggaaacttgac
ccggtgattgggcgggatgaggaaattcggcgggtggtgcaggtcttgtcccggcgcacg
aaaaacaatccggttttgatcggcgaaccgggggtgggaaaaactgccattgccgaaggg
ttggcgcaacggattgtcaacggggatgtgccggaatccctgaaaaatcgccgcctgatt
tccctagatttgggcagtctagtcgccggtgcccgctatcggggggactttgaaaagcgg
ttgcaggcggttctgcgggaagtcacccaagcggaagggcaaattgttttatttgtggat
gaactgcatacggtggtgggtgcgggagcgacccagggcacgatggatgccagtaattta
cttaaacccatgctggcacggggggaattgcgctgtattggtgccacgaccttggatgaa
tatcgtaagtacattgaaaaggatgccgccctagagcgacggtttcagcccatccgggtg
gaagaacccagtttagaggatacggtcgccattttgcggggtttgaaggaacgctacgaa
gtgcatcacggggtgaaaattgccgatgccgccttggtctctgccgttgtgttatccatt
cgttatttacccgaacgatttttacccgataaagccattgatctcattgacgaagcggcg
gcgaaattgcggatggaaattacctcgaaacctgaagaattagaagccctagaccgcagg
ttaatgcaactgcaaatggagcgattgtccctattagaagaccgggatcgcatcagtcaa
gaacgcctgcggaaaattgaccaggaaattaacaccttgagtgcccagcaggcagaatta
aaccagcaatggcagggagaaaaacagattttagaagccatcaaagccctgaagcaggaa
gaggaacaaattcgggtacaaattgagcaagcggaacggaattatgacctaaatcgggcg
gcacaattgaaatacggtcggttggaatccctgcatcaggaattagaggcgaaagaagcg
gcactttccgagattcaagcccgcagttccaccctgttgcgggagcaagttacggaagcg
gatgtggcggaaattgtcgccaaatggacgggcattccggtgcggcgtttgctggaatcg
gaacggcaaaaactcctgcatttggaacagtatttgcaccaaaaagtgattggtcaggaa
caggcggtgaaagcggtcgcggcggcgattcgccgaacccgggcgggcttgaaatcccct
cgccgtcccatcggttcgtttctatttctaggaccaaccggggtcggtaaaacggaactg
gctcgcaccctcgccgaagccctgtttgatagcgaacacgccctggtgcgtctggatatg
tcggaatacatggaaaaacaaaccatttcccgattgttgggagcaccgccggggtatgtg
ggttatgaagaaggggggcaattatcggaagcgattcgccgtcgtccctatgcggtggtg
ttattagatgaaatcgaaaaagcccaccccgatattttcaacatccttttgcaaatttta
gacgatgggcgggtgacggattcccaggggcgggtcgtggattttcgcaataccattatt
gtcatgaccagcaatttgggcagtgaattaattttagaaggcacggaaaccccagaattt
ttagaacccaaaattcgccaactccttgcgacccaatttcgcccagaatttctgaatcgc
attgatgaaactattatctttcattgcttaaaccgggaacaactccggcagattgtgaat
ttgcaaatcgcccaactgcaacaactcctggcagaacaaaatgtgaccttggaagtaacc
gtagccgcccaagagtatttagttgaagtcggttatgatccagcctatggtgcccgtccc
ctgcgccgtgccatccaacgggaattggaaaatgccttagcggattttatcctcagtcaa
aatcaagcgaaccctatgcaaattatggtggatgtgcaggggggaaaactgcatttatcg
cccctttgcgaaccccatttacccgtcccggctcggatttga
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