Gloeomargaritales cyanobacterium VI4D9: LQF76_10370
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Entry
LQF76_10370 CDS
T08937
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
gcy
Gloeomargaritales cyanobacterium VI4D9
Brite
KEGG Orthology (KO) [BR:
gcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gcy03009
]
LQF76_10370 (rimO)
Enzymes [BR:
gcy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LQF76_10370 (rimO)
Ribosome biogenesis [BR:
gcy03009
]
Prokaryotic type
ribosomal protein modification factors
LQF76_10370 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
PKC_C2
Motif
Other DBs
NCBI-ProteinID:
WAS04426
LinkDB
All DBs
Position
complement(2204028..2205344)
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AA seq
438 aa
AA seq
DB search
MSSRPKVAFTHLGCEKNRIDTEHMLGLLTTAGYQVGSDPERADYVIVNTCSFIEAARQES
VRTLVELAEADKKIVITGCLAQHFQGELLAAIPEAVALVGTGDYQHIVQVLEAVEQGQKV
SQVTAKPTYIADETVPRYRTTCAPVAYLRVAEGCDYRCAFCIIPHLRGDQRSRPIASIVA
EAQELADQGVQELILISQITTNYGLDLYGKPHLAQLLYALGEVPVPWIRVHYSYPTGLTP
EVLQAFRDVPNVLPYIDLPLQHSHPEILRAMNRPWQQEINDRLLDQIREMLPEAVIRTTF
IVGFPGETAAHFAHLCDFVERHQFDHVGVFTFSAEAGTPAATLPGQIKEAVKRQRQKVLM
QKQQPISFAKHQQYVGRVVEVLIEQENPQTGIKVGRSARFSPEVDGQVYVSGRAQLGTIV
PVKITQAEVYDLIGATDS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcccgtcccaaggttgcgtttacccatctcggctgcgaaaaaaatcgcattgat
acggaacatatgctggggttgctgacgacggcgggttatcaggtgggcagtgacccggaa
cgggcggattatgtaattgtcaatacctgtagttttatcgaggccgcccggcaagaatcg
gtgcgaaccttggtggaactggcggaagcggacaaaaaaatcgtgatcacgggttgcctg
gcgcaacattttcagggcgaattactggcggctatcccggaggcggtcgctctggtgggg
acgggggactatcaacacattgtccaggtgctggaggcggtggagcaggggcaaaaagtc
tctcaggtaacggcaaaacccacctacattgcggatgaaaccgtgccccgttatcgtacc
acctgtgcgccggtggcctacctgcgggtggctgagggctgtgattatcgctgtgcgttt
tgcattattccccacctgcggggtgaccaacgttcccgtccgattgcctcgattgtggcg
gaagcccaggaattggcggatcaaggggtgcaggaattgattttgatttcccaaatcacc
actaactacgggctggatttgtacgggaaaccccacctcgcccaactcctctatgccctg
ggggaagtgcccgtgccgtggatacgagtgcattacagttatcccaccggtctcacgccg
gaagtgttgcaggccttccgggatgtgccgaatgtcttgccctacattgacctgcccttg
caacattcccatccggagattttgcgggcgatgaaccggccttggcaacaggaaatcaat
gaccggctccttgaccaaatccgggagatgctccccgaggcggtgattcggacgaccttt
atcgtgggatttccgggggaaacggcggcgcattttgcccatttgtgtgatttcgtagag
cgacaccaattcgatcatgtgggggtgtttaccttctcagcggaagcgggtaccccggcg
gcgaccctccctggtcaaattaaggaagctgttaaacggcaacgccaaaaagtcttaatg
caaaagcaacagcccatttcttttgctaaacatcagcagtacgttggtcgggtcgtggag
gtgttaattgagcaggaaaacccccaaaccggcatcaaagtgggacggtcagcccggttt
tccccagaggtggacgggcaggtgtacgtgtctggcagggcacagctagggacaattgtg
ccggtgaaaatcacccaagcggaggtctatgacctaattggggcaacggattcatag
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