Gloeomargaritales cyanobacterium VI4D9: LQF76_10630
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Entry
LQF76_10630 CDS
T08937
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
gcy
Gloeomargaritales cyanobacterium VI4D9
Brite
KEGG Orthology (KO) [BR:
gcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gcy03400
]
LQF76_10630
DNA repair and recombination proteins [BR:
gcy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LQF76_10630
Archaeal homologous recombinant proteins
LQF76_10630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
Rad50_zn_hook
AAA_21
ABC_tran
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
WAS04475
LinkDB
All DBs
Position
complement(2253324..2256326)
Genome browser
AA seq
1000 aa
AA seq
DB search
MIPRQLTLSNFLSYRQASLDFSGLHTACICGPNGAGKSSLLEAMTWALWGESRATNADDV
IRTGCMEARVDFSFSSGGQTYRVIRARRRGHSTLEFQVLAQGRWQPLTQRAIKDTQDLIN
RELKLDYSTFIHSAYLRQGRADEFMLKTPSKRKEVLASLLQLEHYDELSEQAKKRANDHE
LQAKNLQQTLTAQESELAQEPEIQHQYQALQKEIQVTQITTEQYQTQLHQYQIQQQQRHQ
WVEQHQWLSQQRTQLSEDYAQTQTRIERLQQHITQLENLLAQSETITQAYQTYTDLQQRE
EQLNQQSQRQQQLQREYNQLQAEYQQVLHQLELQRQQHHAQRHALLQNLEKLALIRQSAS
EIAPALAQLAAARRHLEHLDQQAEQYKPLYDHYQTLRQQQEQTRTRQSAQLQEQQRQLVH
RQEQLNRLGNLEQERAELAREFAELDKKKVYLDHVEEKGKERRSFQDSLNARLQNYETQL
AQLIKKSELLQQPGAVCPLCARPLDAQHWQVVQKKQELERRELEEAIWLTKEQITVTGRE
LQVLREEYERIKKQCQYREQLNQKQGQLNQKIQQKQELQAQIEHIQVHIQQLEASLAQPE
TSPELEQITASLAALNYDEQAHICARAEVEKWRWVEIKQAEIQNAEKEHATLSLQLAQLE
QKCRDLEHQITQATHHSPLRYQLDSLEQQLADLAYDASTHQAIRQQLQQQQSAPLRYQEL
QRAQQEYPDLIAEMQTLTATALTKAQRIQELEQQLDNIENTLAQLPDLTATIRELETQIQ
GQQQRLQTQYIHSGTLQQRLQHLAQLRQQYHQGQQELQRHEHQQQIYRALTQAFGKNGIQ
ALMIEQVLPQLQATANHILGRLSNHQLHVQFRTQKPKKSGANKNQLVETLEIYIADHQGT
RPYETYSGGEAFRVNFAIRLALARLLTQRAGATLQLLIVDEGFGTQDAQGCDRLIAAISA
ISDEYACILMVTHMPNLKEAFSTRIEVSKTEQGSQVQLVL
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
gtgattccccggcaattaaccctcagtaatttcctaagttatcgtcaggccagtttagat
tttagtggtctgcacaccgcctgtatctgtggacccaacggtgcgggcaaatcctctctg
ctggaagccatgacctgggcgttgtggggggaatcccgcgccaccaatgccgatgacgtg
attcgtaccggctgtatggaagcccgagtggattttagcttcagcagtggcggtcagacc
taccgggtgattcgggcacgcaggcgggggcatagcaccctggagtttcaggttctggcg
cagggacgctggcaacccctgacccaacgggcgatcaaggatacccaggatttgatcaac
cgagaattgaaactggattattccacctttatccattccgcctatctgcgccaggggcga
gcggatgaatttatgctcaaaacccccagcaaacgcaaggaagtgttggcgagtttattg
caactggagcactacgatgaattgtcagagcaggcgaaaaaacgagccaatgaccatgaa
cttcaagccaaaaacctccagcaaaccctgaccgcccaagaatcggaattagcacaggaa
ccagaaattcaacaccaataccaagccctacaaaaagaaattcaggtaacccaaattact
acagagcaataccaaacccaactgcaccaataccaaatccagcaacagcaacggcaccag
tgggtcgaacagcaccaatggctcagccaacaacgcacccaactcagcgaggattacgcc
caaacccaaacccgcatcgagcggttacaacaacacattacccaactcgaaaacctgtta
gcccaaagcgaaacaattacccaagcctatcagacctacaccgacctgcaacaacgggaa
gaacagctgaaccaacagtcccaacggcaacagcaactccagcgggaatacaatcaatta
caagcggaatatcaacaggttttgcatcaactcgaactgcaaagacaacagcaccacgcc
caacgccacgccctgcttcagaacctggaaaaactggcattgatccgccaaagtgcctct
gaaattgccccagccctcgcccaacttgccgctgcccgccgacaccttgagcatcttgac
cagcaagccgagcagtacaaacccctctacgaccactatcaaaccctccggcaacagcag
gaacagacccgtacccgccagtccgcccaactccaggaacagcaacggcaactggtgcat
cgccaggaacaactcaaccgcctgggcaacctagagcaggaacgggcagaacttgcgcgg
gaatttgccgaattagataaaaagaaagtttatttagaccacgtcgaagaaaagggaaaa
gagcgccgaagttttcaagatagcctcaacgcccgtttacaaaactatgaaacccaactg
gcacaactcattaaaaaaagtgaattgctccaacaaccgggagccgtctgtcccctctgc
gcccgccccctcgatgcccagcactggcaagtggtgcaaaaaaaacaggaattagaacgc
cgagaattagaagaagccatctggctcaccaaggaacaaattaccgtcaccggcagggaa
cttcaggttttacgagaggaatacgaacggattaaaaagcaatgccaataccgggaacaa
ctcaaccaaaaacaagggcaactcaatcaaaaaattcaacaaaagcaggaactccaagcc
caaattgagcacattcaggttcacattcaacaactagaagccagccttgctcaaccggaa
accagccccgaacttgagcaaattacggcaagtctagcggcgctcaactacgacgaacaa
gcccacatctgcgcccgtgccgaagtagaaaaatggcgttgggtggaaattaaacaagcg
gaaattcaaaacgctgaaaaagaacacgccaccctatcgctacaactagcgcaattagag
caaaaatgccgggatttagaacaccaaattacccaagcgacccaccattcccccctgcgt
taccaattggatagccttgaacaacaacttgccgatttagcctacgatgcctctacccac
caagccattcgccagcaattacagcaacaacaatctgcccccttacgctatcaagaactc
caacgggcacaacaggagtacccggatttaatcgcagagatgcaaaccctcaccgccacc
gccctgaccaaggcgcaacggatacaggaactcgaacaacaattagacaacattgaaaac
acccttgcccaactccctgatttgaccgccacgatcagggaactagaaacccaaattcaa
gggcaacaacaacgattacaaacccaatacattcacagcggcaccctgcaacaacgactg
caacatctcgcccaactgcgccaacaataccaccaagggcaacaggaactccaacggcat
gaacatcaacagcaaatctatcgggcattgacccaagccttcgggaaaaatggcattcaa
gccctgatgatcgagcaggttttgccccaattgcaagccaccgccaatcacattttggga
cgtttgagtaaccatcaactccatgtgcagtttagaactcaaaaacccaaaaaaagtggt
gccaataaaaatcaactggtggaaaccctggagatttacatcgccgaccatcagggcacc
cgtccttatgaaacttactccggcggggaagccttccgggtgaattttgccatccgcctt
gccctcgctcgcctgcttacccaacgggcgggagccacgttacaattgctaatcgtggat
gaggggtttggcacccaggatgcccagggctgtgaccggctgatcgccgccattagtgcc
atcagcgacgaatacgcctgtatcctgatggtgacccatatgcccaacctgaaagaggct
ttttccacccgtatcgaagttagtaaaaccgagcagggttctcaggtgcagttggtattg
tga
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