Gluconacetobacter diazotrophicus PA1 5 (Brazil): GDI0060
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Entry
GDI0060 CDS
T00631
Name
(GenBank) conserved hypothetical protein
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
gdi
Gluconacetobacter diazotrophicus PA1 5 (Brazil)
Brite
KEGG Orthology (KO) [BR:
gdi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
gdi02048
]
GDI0060
Enzymes [BR:
gdi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
GDI0060
Prokaryotic defense system [BR:
gdi02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
GDI0060
Subtype I-B factors
GDI0060
Subtype I-C factors
GDI0060
Subtype I-D factors
GDI0060
Type II CRISPR-Cas system
Subtype II-B factors
GDI0060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas_Cas4
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CAP54003
RhizoBase:
GDI0060
UniProt:
A9GZU5
LinkDB
All DBs
Position
complement(66416..67072)
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AA seq
218 aa
AA seq
DB search
MHAPPDNATEDALVPISALQHHLFCPRQCALIHVERIWAENGATAEGRILHERVDDGRPD
RRTGVRTVRALTIRSLTLGVFGKADAVEFHGVETAAVPYPVEYKRGRPKAHRADEVQLCA
QAICLEDMFGHSVPEGALFYGQPRRRTVVVFDGALRTLTEQTARKVRAMIADCLTPPPVY
KASCNQCSLQHACQPRRLEKPPSIGRWFATQLLEEDNA
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgcacgccccgcccgataatgcgaccgaagacgcgttggttcccatttccgccttgcag
catcatctgttctgccccaggcaatgcgcgctgatccatgtcgagcggatctgggcggaa
aatggtgcgacggcggagggccgcattttgcacgaacgggtggatgacggccgtcccgat
cgccggacaggcgtacgcacggtccgcgcgctgacgatacggtcgctgacgctgggtgtc
ttcggcaaggccgatgcagtggaattccacggtgtcgagaccgccgccgtgccctatccg
gtcgaatacaagcgcggccgccccaaggcccatcgcgccgatgaggtccagctttgcgcc
caggccatctgcctggaagacatgttcggacattccgtgccggagggcgcgttgttttac
ggccagccccggcggcgcacggtggtggtgttcgatggtgccctgcgtacgctgaccgag
caaaccgcgcggaaggtccgcgccatgatcgcggactgcctgactccaccgcctgtctac
aaggcctcttgcaatcaatgctccctgcagcacgcctgccagccgcgccgattggaaaag
cctccctcaatcggccgctggtttgcgacacaactgctggaagaagacaacgcgtga
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