Gluconacetobacter diazotrophicus PA1 5 (Brazil): GDI0715
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Entry
GDI0715 CDS
T00631
Name
(GenBank) putative UvrD/REP helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
gdi
Gluconacetobacter diazotrophicus PA1 5 (Brazil)
Brite
KEGG Orthology (KO) [BR:
gdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gdi03400
]
GDI0715
Enzymes [BR:
gdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GDI0715
DNA repair and recombination proteins [BR:
gdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GDI0715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
CAP54658
RhizoBase:
GDI0715
UniProt:
A9HA89
LinkDB
All DBs
Position
728478..732032
Genome browser
AA seq
1184 aa
AA seq
DB search
MNPLDAIGLANARQGEASDPGASVFVSASAGSGKTKLLIDRLLRLMLPRPAPTRGGTGRG
TCLRGRTRRAIQCLTFTKAAAAEMAIRLQKPAGELGNAARRVPGPGTGLPVGPAVRGDTP
RGTRMFARVLDLPGGMRIGTIHAFCQSLLRRFPVEAAISPHFTLVEDTDARIAMGESVEA
VVGGGGPAVAILASQIGAGDFAALIGGLQARLRQLQPVITALEQDRAAIEAALMRVLGTR
GRDADAVRRAACAVPDEERLRGMLRIVAEQASTAVRAKAVAMLDWMALAPDARAAQWTRG
ARPCEAGRRTAPPGRPTRNSTKRSRRSATPLLAEAERIIAVDEECRAIAILRVSQALLDV
AVPVLHRYGERKRGRGLVDYDDLIERTLDLLKDPGAAWVLYKLDGGIDHLLLDEVQDTSP
DQWAIAGGLTSEFFAGAGAHDDGAPPRTLFAVGDYKQSIYSFQGADPAAFRHWRQRFRRQ
VEDAGRMWKEPALTVSFRSTAPVLRLVDSVFSLPDAARGLVEPGGGVPGHLSARPGQGGR
VELWPLTPIDEAGEDANPWAAPRENAGQSTAAQRLADSLAAWIVAELRRPPEPGQAPLTP
GDVLVLVPRRSNFVRALIRALKTQDVPVATLVRTGLVDQVAVQDLMALCDALLLPQDDLT
LACVLTSPLGGVSDDGVMDLAVGRGDRPLWAVLRDRHAERPDWRAAWTMLDALFRRVDYA
SPYGLLSEALGPLGGRARLLARLGPEAAEPVDELLSAALRYESLHPASLQGFLHWLRASQ
ETVKREPDAAADMVRVMTAHGAKGLQARLVILPDTVGTAKFDGGLVWARDQPSGLDLPLW
VPRAEMGIGVTRALQQTIRAAAIEEYNRLLYVALTRASDRLVVCGWQQKRMVTDESWYML
CRRGFEQAGAEERPFDLGWEGTRLVLEEAPARLSGAPAAPRSRPEPPAVALPAWMGRAPD
WIATPPSAEAKLLRPLVPSRPDDAPLGPQPAVRSPLAIARARRPAAREQALRKGQLVHAL
LQYLPDRPAADRARVARDWLSRTGHGLDAAEQARIAAQVLAVMDDPAMAPLFGPGSRAEQ
PLAGIAGGAVIVGQVDRMMVRPGDVLLCDFKTNRQPPDDAASVPVLYLRQMASYHALLGA
LYPDRPVRCTLVWTEDVRIMPLPDSLLAHHAPGQASGGQTPEGP
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgctggatgcgatcggcctggccaacgccaggcagggcgaggcctcggacccg
ggggcgtcggtcttcgtctcggcctcggcgggcagcggcaagaccaagctgctgatcgac
cggctgctgcggctgatgctgccgcgccccgcgcccacgcgaggggggacggggcggggg
acctgcttgcgggggcggacccggcgcgcaatccagtgcctgaccttcaccaaggcggcg
gcggcggaaatggcgatccgcctgcagaagccggctggggagttgggtaacgctgcccga
cgcgtccctggaccgggaactggccttcctgtcggtcccgccgtgcgaggcgacacgccg
cgcggcacgcgaatgttcgcccgcgtgctggacttgccgggcggaatgcggatcggcacc
atccatgccttctgccagtccctgttgcggcgctttccggtcgaggccgcgatcagcccg
catttcaccctggtcgaggacacggatgcccgcatcgccatgggcgaatccgtcgaagcc
gtggtcggcggcggcgggccggcggtcgcgatcctggccagccagatcggtgccggggat
ttcgccgccctgatcggcggattgcaggcccggctgcggcagttgcagccggtcatcacg
gcgctggagcaggaccgcgccgcgatcgaggccgcgctgatgcgcgtgctgggcacgcgc
ggccgcgatgcggacgcggtgcgccgcgccgcctgcgccgtcccggacgaggagcggctg
cgcgggatgctgcgtatcgtggccgaacaggcctcgaccgccgttcgcgccaaggccgtc
gcgatgctggactggatggccctggcgccggacgcccgcgccgcgcaatggacgcgtggc
gcgcggccctgtgaagcaggacggcgaaccgcgccgccggggcggcccacgcgaaattcg
acgaaacgcagccgcagatcggcgacgcccttgctggccgaggccgagcggatcatcgcg
gtggacgaggaatgccgggccatcgccatcctgcgcgtcagccaggccctgctggatgtc
gcggtgccggtgctgcatcgctatggcgagcgcaagcgcgggcgcggcctggtcgattac
gacgacctgatcgaacggaccctggacctgctgaaggacccgggcgcggcctgggtgctg
tacaagctcgatggtggcatcgaccacctgctgctggacgaggtgcaggacacctcgccc
gaccagtgggcgatcgcgggcggcctgacctcggaattcttcgccggggcgggcgcgcat
gatgacggcgccccgccgcgcaccctgttcgcggtcggcgactacaagcagtccatctat
tccttccagggggccgatcccgccgccttccgccattggcgccagcgcttccgccgccag
gtcgaggatgcgggcaggatgtggaaggaaccggcgctgaccgtgtccttccgctccacc
gcgccggtgctgcgcctggtggacagcgtcttttccctgcccgacgccgcgcgcggactg
gtcgagccgggcgggggcgtgcccggccatctctccgcccggccggggcagggcgggcgg
gtcgaactctggccgctgaccccgatcgacgaggccggcgaggacgccaacccgtgggcg
gccccgcgcgagaatgccgggcaatccaccgccgcccagcgcctggccgattccctggcc
gcctggatcgtggcggaattgcgccgcccgcccgaacccgggcaggccccgctgacgccg
ggcgacgtgctggtgctggtgccccggcgctccaatttcgtgcgggccctgatccgcgcg
ctgaagacgcaggacgttccggtggcgacgctggtgcgcaccggcctggtggaccaggtg
gcggtgcaggacctgatggcgctgtgcgacgcgctgctgctgccgcaggacgacctgacg
ctggcctgcgtgctgacctcgccactgggcggggtgtcggatgacggggtgatggacctg
gcggtcggacgcggcgaccggccgctctgggccgtgctgcgcgaccgccatgccgaacgg
ccggactggcgcgcggcctggacgatgctggatgcgctgttccgccgcgtcgattacgcc
tcgccctacggattgctgtccgaggcgctggggccgctgggcggccgcgcccgcctgctg
gcccgcctgggtcccgaggccgccgagccggtggacgaactgctctccgcggccctgcgc
tacgaatcgctgcatccggcctcgctgcaggggttcctgcactggctgcgcgcgtcgcag
gaaaccgtgaagcgcgaacccgacgcggcggccgacatggtgcgggtcatgaccgcccat
ggcgccaagggattgcaggcccggctggtgatcctgcccgacacggtgggcacggcgaag
ttcgacggcggcctggtctgggcacgggaccagcccagcggcctggacctgccgctgtgg
gtgccgcgcgccgaaatgggcatcggcgtgacccgcgcgctgcagcagaccatccgcgcc
gccgcgatcgaggaatataaccgtctgctctatgtcgccctgacccgggccagcgaccgg
ctggtggtctgcggctggcagcagaagcgcatggtgacggacgaaagctggtacatgctc
tgccgtcgcggcttcgaacaggccggcgccgaggaacgccccttcgacctggggtgggaa
ggcactcgcctggtgctggaggaagcccccgcgcgcctgtccggcgcccccgccgcgccc
cgatcccggcccgagccccccgccgtggcgctacccgcctggatgggccgcgcgccggac
tggatcgccaccccgccctccgccgaggcgaagctgctgcgcccgctggtgcccagccgc
cccgacgatgccccgctgggcccgcagcccgccgtgcgctcccccctggccatcgcacgc
gcccgccgccccgccgcgcgcgaacaggccctgcgaaaggggcaactggtgcatgcgctg
ctgcaatacctgcccgaccggccggcggccgatcgcgcccgggtcgcgcgcgactggctg
tcgcgtaccgggcatggcctggacgccgccgaacaggcacgcatcgccgcccaggtgctg
gcggtgatggacgatccggccatggcgccgttgttcggacccggcagccgcgcggagcag
cccctggccggcatcgccggcggtgcggtgatcgtcggccaggtcgaccgcatgatggtg
cggcccggcgacgtgctgctgtgcgatttcaagaccaaccgccagccgccggacgacgcg
gcatcggtgcccgtgctgtacctgcgccagatggcgtcctaccacgcgctgcttggtgcc
ctctatcccgatcgccctgttcggtgcacccttgtgtggaccgaggacgtccggatcatg
cccttgcccgattcgcttctggcacatcatgctccgggtcaggcctcaggcgggcagacg
cccgaaggaccataa
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