Gluconacetobacter diazotrophicus PA1 5 (Brazil): GDI1257
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Entry
GDI1257 CDS
T00631
Symbol
rho
Name
(GenBank) Transcription termination factor rho
KO
K03628
transcription termination factor Rho
Organism
gdi
Gluconacetobacter diazotrophicus PA1 5 (Brazil)
Pathway
gdi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GDI1257 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gdi03021
]
GDI1257 (rho)
03019 Messenger RNA biogenesis [BR:
gdi03019
]
GDI1257 (rho)
Transcription machinery [BR:
gdi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GDI1257 (rho)
Messenger RNA biogenesis [BR:
gdi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GDI1257 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
S1CSD-TOTE-2
AAA_22
AAA
NACHT
Fungal_virus_P2_C
Motif
Other DBs
NCBI-ProteinID:
CAP55200
UniProt:
A9HE94
LinkDB
All DBs
Position
1251981..1253288
Genome browser
AA seq
435 aa
AA seq
DB search
MHLAELKAKTPADLLAYAESLQIENASSLRKQDMMFAILKTLADNDQAIHGEGTLEILPD
GFGFLRSPEANYLPGPDDIYISPSQVRRFGLRTGDTVEGQIRAPRDGERYFALLKVNTIN
FEPPEAVRHRINFDNLTPLYPERRLKMEVEANAVGGEPEKVEKGKGAKSQPKDFTPRVID
LVSPIGMGQRALIVAPPRTGKTVMLQSIASSISANHPEVFLIVLLIDERPEEVTDMARSV
RGEVVSSTFDEPATRHVQVTEMVLEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGK
VLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEL
ILDRKLADKRTFPAIDITKSGTRKEELLVERSELSKMWVLRRILAPMGTMDAMDFLLDKL
KYSKTNRDFFDAMNT
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcgccgaactcaaggccaaaacccccgcggaccttctggcgtacgccgaaagc
ctgcagatcgagaacgcgtcgtccctgcgcaagcaggacatgatgttcgccatcctcaag
accctcgccgacaatgatcaggcgatccatggcgagggaacgctggaaatcctgcccgac
gggttcggcttcctgcgctcgcccgaggccaattacctgcccgggccggacgatatctat
atctcgcccagccaggtgcggcgcttcggcctgcgcaccggcgacacggtcgagggccag
atccgcgccccgcgcgacggcgagcgctatttcgcgctgctgaaggtcaacacgatcaat
ttcgagccgcccgaggccgtccgtcaccggatcaatttcgacaacctgacgcccctctac
cccgagcgccggctgaagatggaagtcgaggccaacgccgtgggcggcgagcccgagaag
gtcgagaagggcaagggcgccaagtcccagcccaaggatttcaccccccgcgtgatcgac
ctggtctcgccgatcggcatggggcagcgcgcgctgatcgtcgccccgccgcgcaccggc
aagaccgtgatgctgcagagcatcgcctcgtcgatttccgccaaccaccccgaagtcttc
ctgatcgtcctgctgatcgacgagcgcccggaagaagtcaccgacatggcccgctccgtc
cggggcgaggtcgtgtcctcgaccttcgacgagccggcgacccgccacgtccaggtgacg
gaaatggtgctggagaaggccaagcggctggtcgagcataagcgcgacgtcgtcatcctg
ctggattccatcacccgcctggcccgcgcctacaacaccgtggtgccgtcatcgggcaag
gtgctgaccggcggcgtggatgccaatgccctgcaacgccccaagcgcttcttcggcgcc
gcgcgcaatatcgaggaaggcggatcgctgaccatcatcgccaccgcgctgatcgatacc
ggcagccgcatggacgaggtgattttcgaggaattcaagggcaccggcaactcggaactc
atcctcgaccgcaagctggccgacaagcgcaccttcccggcgatcgacatcaccaagagc
ggcacccgcaaggaagaattgctggtcgaacgctccgaactgtcgaagatgtgggtcctg
cgccgcatcctggcgccgatgggcacgatggacgcgatggactttctgctggacaagctg
aaatacagcaagaccaaccgggatttcttcgacgcgatgaatacctga
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integrated database retrieval system
