Gluconacetobacter diazotrophicus PA1 5 (Brazil): GDI1371
Help
Entry
GDI1371 CDS
T00631
Symbol
pnp
Name
(GenBank) putative polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gdi
Gluconacetobacter diazotrophicus PA1 5 (Brazil)
Pathway
gdi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GDI1371 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gdi03019
]
GDI1371 (pnp)
03016 Transfer RNA biogenesis [BR:
gdi03016
]
GDI1371 (pnp)
Enzymes [BR:
gdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GDI1371 (pnp)
Messenger RNA biogenesis [BR:
gdi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GDI1371 (pnp)
Transfer RNA biogenesis [BR:
gdi03016
]
Prokaryotic type
tRNA degradation factors
GDI1371 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
CAP55314
UniProt:
A9HF35
LinkDB
All DBs
Position
1372696..1374834
Genome browser
AA seq
712 aa
AA seq
DB search
MFNYYRKEIEWGGRPLVLETGKIARQADGAVVVTYGDTVVLCTAVGARSVKPGQDFFPLT
VNYQEKAFAAGKIPGGFFKREGRPSEIEVLNSRLIDRPIRPLFPENFRNEVQVVATVLSH
DLENDPAIAALIGCSAALTLSGIPFFGPVAACRVGYADGAYILNPTLPEMKESALDLVVA
GTSEGVLMVESEASELSEDVMLGAVTFGHEAFQAVIDAIISLAEHAAKAPWDLAEPSAEE
IALKQRIDTLGRAAIAEAYQERVKQQRYKKVGAAKEAVLAALATEGLDVTAAKPILKDLE
ADVVRSAVLDTGYRIDGRDLKTVRPIVSEVGILPRAHGSALFTRGETQALVVATLGTAQD
EQVIDALEGEYRTNFMLHYNFPPYSVGECGRMGSPGRREIGHGKLAWRAIHPLLPGKDTF
PYTMRIVSEITESNGSSSMATVCGTSLALMDAGVPLKRPVAGIAMGLIKEDRGFAVLSDI
LGDEDHLGDMDFKVAGTESGITALQMDIKITSITPEIMKIALGQARDGRLHILGEMSKAL
TEGRSDVSSTAPKITTISVPKEKIRDVIGQGGKVIREIVEYSGAKIDINDDGTIMIAASS
EDQATRAIERIRGIVAEPELGAIYTGKVVKTADFGAFVNFLGARDGLVHISELAQGRVAK
TTDVVNQGDVVKVKVLGFDDRGKVKLSMRVVDQQTGADITESVGERPGRPAR
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgttcaattactaccgcaaggaaatcgagtggggcggccgtccgctggtgctggaaacg
ggcaagatcgcccgccaggccgacggcgccgtggtcgtgacctatggcgacacggtcgtg
ctgtgcaccgccgtcggcgcccgcagcgtcaagccgggccaggatttcttcccgctgacc
gtcaactaccaggaaaaggccttcgcggccggcaagatcccgggtgggttcttcaagcgc
gagggccgtccgtccgagatcgaggtcctgaattcccgcctgatcgaccgtccgatccgc
cccctgttccccgagaacttccgcaacgaggtgcaggtcgtagccacggtgctgagccac
gacctggagaacgatcccgcgatcgcggcgctgatcggctgctcggccgcgctgacgctg
tcgggcatcccgttcttcggtccggtggcggcctgccgcgtcggttacgcggacggggcc
tatatcctgaacccgaccctgcccgaaatgaaggaaagcgcgctggacctggtcgtcgcc
ggtacgtccgaaggcgtgctgatggtcgagtccgaggcgagcgaactgagcgaagacgtc
atgctgggcgccgtgaccttcgggcatgaagcgttccaggccgtcatcgacgccatcatc
tcgctggccgagcatgcggccaaggcaccgtgggacctggccgagccgtcggccgaggaa
atcgcgctgaagcagcggatcgacacgctgggccgcgccgcgatcgccgaggcgtatcag
gagcgcgtgaagcagcagcgctacaagaaggtcggcgccgccaaggaagccgtgctggcg
gccctggccaccgaagggctggacgtcaccgcggccaagccgatcctgaaggatctggaa
gccgacgtggtgcgcagcgcggtgctggataccggctaccgcattgacggccgcgacctg
aagacggtccgcccgatcgtctccgaggtcggcatcctgccgcgcgcccatggttcggcc
ctgttcacccgtggcgagacccaggccctggtcgtcgccaccctgggcaccgcccaggac
gagcaggtgatcgacgcgctggaaggcgaataccgcaccaacttcatgctgcactacaac
ttccccccctattcggtgggtgaatgcggccgcatgggctcgcccggccggcgcgagatc
gggcatggcaagctggcctggcgcgcgatccatccgctgctgcccggcaaggacaccttc
ccgtacacgatgcgcatcgtgtccgagatcaccgagagcaacggatcgtcctcgatggcc
acggtctgcggcacctcgctggcgctgatggatgcgggcgtgccgctgaagcgtccggtg
gcgggcatcgccatgggcctgatcaaggaagatcgcggcttcgccgtgctgtccgacatc
ctgggtgacgaggatcacctgggcgacatggacttcaaggtcgcgggcaccgaatccggc
atcaccgcgctgcagatggacatcaagatcacgtccatcacgcccgagatcatgaagatc
gccctgggccaggcgcgcgacggccgcctgcacatcctgggcgagatgtccaaggcgctg
accgaaggccgttcggacgtgtcctccaccgcgccgaagatcaccacgatctcggtgccg
aaggaaaagatccgtgacgtgatcggccagggcggcaaggtgatccgcgagatcgttgaa
tattcgggtgccaagatcgatatcaacgatgacggcacgatcatgatcgcggcctcgtcc
gaagatcaggccacccgcgcgatcgaacggatccgcggcatcgtggccgagcccgagctg
ggcgcgatctacaccggcaaggtggtcaagaccgccgatttcggtgcgttcgtgaacttc
ctgggcgcgcgcgacggcctggtccatatctcggaactggcgcagggccgggtggcgaag
accacggacgtcgtcaaccagggcgacgtggtgaaggtcaaggtcctgggcttcgacgat
cgcggcaaggtcaagctgtcgatgcgggtcgtcgaccagcagaccggcgcggacatcacc
gagtccgtcggcgagcgcccgggccgtccggcacgctga
DBGET
integrated database retrieval system
