Gluconacetobacter diazotrophicus PA1 5 (Brazil): GDI1799
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Entry
GDI1799 CDS
T00631
Symbol
holB
Name
(GenBank) putative DNA polymerase III delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
gdi
Gluconacetobacter diazotrophicus PA1 5 (Brazil)
Pathway
gdi03030
DNA replication
gdi03430
Mismatch repair
gdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GDI1799 (holB)
03430 Mismatch repair
GDI1799 (holB)
03440 Homologous recombination
GDI1799 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gdi03032
]
GDI1799 (holB)
03400 DNA repair and recombination proteins [BR:
gdi03400
]
GDI1799 (holB)
Enzymes [BR:
gdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GDI1799 (holB)
DNA replication proteins [BR:
gdi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GDI1799 (holB)
DNA repair and recombination proteins [BR:
gdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GDI1799 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_22
NACHT
nSTAND3
AAA_16
Mg_chelatase
AAA_30
AAA_5
TIP49
Motif
Other DBs
NCBI-ProteinID:
CAP55742
UniProt:
A9HIA0
LinkDB
All DBs
Position
1830347..1831288
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AA seq
313 aa
AA seq
DB search
MVGQQEARRAFEDALRTGRLHHAWLLTGTEGIGKATMAFWMARLLLKGTDPDSPAARRIA
AGSHADLLTIARGVDEKRQRLRAEIVADDVRPIGQFLHRTAAEDGWRVVIVDGAEYMNRS
AANAILKLLEEPPPRAILILTCATPGRLLPTIRSRCRTLKLGPLSPADMHAVLSTVVEDA
APDDIARVVPLAHGSPGRALALLAGDGGALGALVARVMDAPAGPGAMREGEMYEIAEAVL
KRENGFSVFFDLLCDAISVRTRAAVRGTIPAERPADRMVDLWRRLVHLRAETEQFNLDKH
QAILSGLTLVSGI
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
ctggtggggcagcaggaagcgcgacgcgcgttcgaggacgcgcttcgcaccgggcggctg
catcacgcctggctgctgaccggcaccgagggcatcggcaaggcgacgatggccttctgg
atggcgcggctgctgctgaaggggacggaccccgacagtcccgccgcacggcggatcgcc
gccggcagccatgccgacctgctgaccatcgcccggggggtggatgaaaagcggcagcgc
ctgcgcgctgaaatcgtggccgacgacgtgcggccgatcggccagttcctgcaccgcacg
gcagccgaggatggctggcgcgtcgtgatcgtggacggcgcggaatacatgaaccgcagc
gccgccaacgcgatcctgaaactgctggaggaaccgcccccgcgcgccatcctgatcctg
acctgcgccacgccggggcgcctgctgccgacgatccgcagccggtgccggacgctgaag
ctgggcccgctgtcgcccgccgacatgcatgccgtcctgtccacggttgtcgaggacgcg
gcccccgacgacatcgcgcgcgtcgtgccgctggcccatggatcgccgggccgggcgctg
gcgttgctggcgggtgacggcggcgcgctgggcgccctggtcgcgcgcgtgatggacgcg
ccggcaggcccgggagccatgcgggaaggagagatgtacgagattgcggaagcggtcctg
aagcgggagaatggcttttccgtcttcttcgatctgctgtgcgatgccatatcggtgcgc
acccgcgccgccgtgcgcggcacgatcccggcggaaaggccggccgaccgcatggtcgat
ctctggcgtcgtctggtccatctgcgggccgagacggaacagttcaatctggataaacat
caggccatcctgagcggcctgacattggtgagtggaatatga
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