Gluconacetobacter diazotrophicus PA1 5 (Brazil): GDI1988
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Entry
GDI1988 CDS
T00631
Symbol
uvrD
Name
(GenBank) putative DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gdi
Gluconacetobacter diazotrophicus PA1 5 (Brazil)
Pathway
gdi03420
Nucleotide excision repair
gdi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GDI1988 (uvrD)
03430 Mismatch repair
GDI1988 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gdi03400
]
GDI1988 (uvrD)
Enzymes [BR:
gdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GDI1988 (uvrD)
DNA repair and recombination proteins [BR:
gdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GDI1988 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
GDI1988 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_22
DUF3553
Motif
Other DBs
NCBI-ProteinID:
CAP55931
UniProt:
A9HJP3
LinkDB
All DBs
Position
2020169..2022400
Genome browser
AA seq
743 aa
AA seq
DB search
MTQTPAPFPERPAADRPDYLQRLNPEQRAAIETTDGPLLVLAGAGTGKTRVLTTRFAHIL
LSGRARPYQILAVTFTNKAAREMRERIGALLGEPVEGLWLGTFHALCARMLRRHAEYVGL
GSGFTILDTDDQLRLLKQVIEPLRIDTKRWPPQGILGVIQRWKDRGLTPERVTPAEDCDF
AGGQCRPIYATYQARLVQLNACDFGDLMLHVTEILRTRPDVLAQYHRLFRYILVDEYQDT
NTIQYLWLRLLAQREGQPANICCVGDDDQSIYSWRGAEVENILRFERDFPGAAVVRLERN
YRSTAQILGAASGLIAHNDGRLGKTLRPGREDASGEKVRVASVWDSDDEARLVGEEVERL
RAGGHSLAEIAILVRAGFQTRAFEERLITLGLPYRVVGGLRFYERSEIRDAMAYMRVLNQ
PADDLAFERIINVPRRGIGAAAMQKFHVAAREGQMPLAAAVMDLIARGALKGRAREQMTA
LMACLARGREALPREGHVVVVETLLEESGYIDMWKADTSPEAPGRLDNLKELVRALADFE
SLGGFLEHVALVMENEENAGAERLSIMTLHGAKGLEFDTVFLPGWEEGVFPSQRTLDEGG
LKGLEEERRLAYVGITRARHRAVISHAASRRIYGNWQSAIPSRFIEELPAEHVTTTGGAA
QARSRTFGHAPLSSTAFPVMARRPRVTDVGEKGPTAAMAVGTRVFHQKFGYGTISSVEGN
RLEVAFEKAGPKRVLDTFVEKIP
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
gtgacccagaccccagcccccttccccgagcgtcccgccgctgatcgtcccgactacctt
cagcggctcaatcccgaacagcgggcggcgatcgagacgaccgacggtccgttgctggtc
ctggccggcgccggcaccggcaagacgcgcgtcctgaccacccgcttcgcccatattctg
ctgtcgggccgggcgcggccataccagatcctggcggtgaccttcaccaacaaggcggcg
cgcgaaatgcgcgagcggatcggcgccctgctgggcgagccggtcgagggattgtggctg
ggcacgttccatgccctgtgcgcgcgcatgctgcgccgccacgccgaatatgtgggcctg
ggcagcggcttcacgatcctggacaccgacgaccagttgcgcctgctgaagcaggtgatc
gaacccttgcgcatcgacaccaagcgctggccgccgcagggtatcctgggcgtcatccag
cgctggaaggaccggggcctgacgcccgaacgcgtgaccccggccgaggattgcgacttc
gccggcgggcagtgccgcccgatctatgccacctaccaggcacggctggtccagttgaac
gcctgcgatttcggcgacctgatgctgcacgtgaccgagatcctgcggacccggcccgac
gtgctggcccagtatcaccggctgttccgctatatcctggtggacgaataccaggacacg
aacacgatccagtatctgtggctgcgcctgctggcccagcgcgagggccagcccgccaat
atctgctgcgtgggcgacgacgaccagtcgatctattcctggcgcggggccgaggtcgag
aacatcctgcgcttcgaacgggacttccccggagccgccgtcgtgcggctggaacgcaat
taccgttccaccgcccagatcctgggggcggcgtccggcctgatcgcgcataatgacggg
cggctgggcaagaccctgcgcccgggacgcgaggacgcatcgggcgagaaggtgcgcgtg
gcgtcggtctgggattcggacgacgaggcccgcctggtgggcgaggaggtcgagcggctg
cgcgccggggggcattccctggcggaaatcgcgatcctggtgcgggccggattccagacc
cgcgcgttcgaggaacggctgatcaccctgggcctgccctatcgcgtcgtcggcgggctg
cgattctacgagcggtcggaaatccgcgacgccatggcctatatgcgggtgctgaaccag
ccggcggacgacctggcgttcgagcggatcatcaacgtgccccggcgcggcatcggcgcg
gccgcgatgcagaaattccatgtcgccgcgcgcgagggccagatgcctctggccgccgcc
gtgatggacctgatcgcgcggggcgcgctgaagggccgcgcgcgcgagcagatgaccgcg
ctgatggcctgcctggcgcgcggacgcgaggccctgccgcgcgaggggcatgtggtggtg
gtcgaaacgctgctggaagaaagcggctatatcgacatgtggaaggccgatacctcgccc
gaggcgcccggacggctggacaacctgaaggaactggtgcgggccctggcggatttcgaa
agcctgggcggcttcctggaacacgtcgcgctggtcatggaaaacgaggagaatgccggc
gccgagcgcctgagcatcatgaccctgcacggcgcgaagggcctggaattcgacaccgtc
ttcctgccgggatgggaggaaggggtcttcccgtcccagcgcaccctggacgagggcggc
ctgaaggggctggaggaggagcggcgcctggcctatgtcggcattacccgggcgcggcac
cgggccgtcatcagccacgccgccagccggcgcatctacggcaactggcaatcggcgatc
cccagccggttcatcgaggaactgccggccgagcacgtcaccaccacggggggcgcggcg
caggcacggtcgcggacgttcggccatgcgcccctctcttccaccgccttcccggtcatg
gcgcggcggccgcgcgtgaccgatgtgggggaaaagggcccgactgccgcgatggcggtg
ggaacgcgggtcttccaccagaaattcggatacggaaccatatcgtccgtcgagggcaac
cggctggaagtcgcgttcgagaaagccggcccgaaacgggtcctggatacatttgtcgag
aagatcccatga
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integrated database retrieval system
