Gluconacetobacter diazotrophicus PA1 5 (Brazil): GDI2107
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Entry
GDI2107 CDS
T00631
Name
(GenBank) putative exodeoxyribonuclease
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
gdi
Gluconacetobacter diazotrophicus PA1 5 (Brazil)
Pathway
gdi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GDI2107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gdi03400
]
GDI2107
DNA repair and recombination proteins [BR:
gdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GDI2107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CAP56050
UniProt:
A9HKJ8
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All DBs
Position
2156861..2157670
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AA seq
269 aa
AA seq
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MDGSIPPSGSPPTPFVRVIDLETSGRNAADGGIVEIGWQDVARDADGTWALAGPPGARLT
HPGGPITPQTMAIHHITDAHVRDAPPFAEIAPDILHPADRPAAMAAHRASFEQGWIRGSL
PPALTTGLHWICTYKCALRLWPDEPGHSNQGLRHSRRPAGLERALGDPPHRAGPDAYVTA
HHLRDMLALATVEQLLRWSREPALLTRVPHGPLRGRQIRNLATGDLDRLLAEDRRRGPDL
AFTLRTERARRAGLNETTLAPPVQQAFRF
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggacggttccatccccccttccggcagcccgcccacgccgttcgtccgcgtgatcgac
ctggaaaccagcgggcggaatgccgccgatggcgggatcgtcgaaatcggctggcaggat
gtcgcccgggacgccgacggcacctgggccctggccggcccacccggggcgcgcctgacc
cacccgggcggccccatcacgccgcagaccatggcgatccatcacattaccgacgcgcac
gtgcgcgacgccccgccctttgccgagatcgcgcccgacatcctgcacccggcggaccgg
ccggcggcgatggcggcccatcgcgccagtttcgaacagggctggattcgcggcagcctg
ccgcctgccctgacgaccggactgcactggatctgcacctataaatgcgcgctgcggctg
tggcccgacgaaccgggacattccaaccagggcctgcgccattcccgccggcctgccggg
ctggagcgcgcactgggcgacccgccgcaccgcgccgggcccgatgcctatgtcacggcg
caccatctgcgcgacatgctggcgctggccacggtggagcagttgctgcgctggtcgcgc
gaacccgccctgctgacccgtgtgccgcacggcccgctacgcggccgccagatccgcaac
ctggcgaccggcgacctggaccggctgctggccgaggaccgccgacgcggccccgacctg
gccttcaccctgcgcaccgaacgcgcgcgccgcgccgggctaaacgagacgacgctagcg
ccgccggttcagcaggcctttcgcttttaa
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