Gluconacetobacter diazotrophicus PA1 5 (Brazil): GDI2114
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Entry
GDI2114 CDS
T00631
Symbol
rnd
Name
(GenBank) putative ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
gdi
Gluconacetobacter diazotrophicus PA1 5 (Brazil)
Brite
KEGG Orthology (KO) [BR:
gdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gdi03016
]
GDI2114 (rnd)
Enzymes [BR:
gdi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GDI2114 (rnd)
Transfer RNA biogenesis [BR:
gdi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GDI2114 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CAP56057
UniProt:
A9HKL8
LinkDB
All DBs
Position
2169303..2169935
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AA seq
210 aa
AA seq
DB search
MTAPATPSILLHRGDLADDVVFHGSIAVDTEAMGLNPHRDRLCLVQISAGDGSAHLVQIL
PGTPSPNLARLMADPSITKLMHFARFDVAILQHSLGVTVAPVICTKIASKLVRTFTERHG
LAQLCRELLGVDLSKQQQTSDWGAPELTPEQKAYAASDVLHLHALWTKLEVLLHREGRRD
LAQACYDFLPTRARLDLLGYEDPDIFAHRA
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacccgcgactccctccatcctgctgcatcgcggcgacctggcggacgacgtg
gtcttccacggttcgatcgcggtggacaccgaggcgatgggcctgaacccgcatcgcgac
cggctgtgcctggtgcagatctcggccggggacggcagcgcgcacttggtgcagatcctg
cccggcacgcccagccccaacctggcgcggctgatggccgacccgtcgatcaccaagctg
atgcatttcgcgcgattcgacgtcgcgatcctgcagcattcgctgggggtgacggtcgcc
cccgtcatctgcaccaagatcgcgtccaagctggtccggaccttcaccgagcgtcacggg
ctggcgcagctctgccgggaactgctgggcgtcgatctgagcaagcagcagcagacctcg
gactggggcgcgcccgaactgacgcccgaacagaaggcctatgcggcgtcggacgtgctg
cacctgcatgccctatggacgaagctggaggtactgctgcatcgcgagggacgacgcgac
ctggcgcaggcctgctacgatttcctgcccacgcgggcccggctggaccttctgggatac
gaagatccggatatcttcgcccaccgggcatga
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