Gluconacetobacter diazotrophicus PA1 5 (Brazil): GDI2153
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Entry
GDI2153 CDS
T00631
Symbol
rnc
Name
(GenBank) putative ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
gdi
Gluconacetobacter diazotrophicus PA1 5 (Brazil)
Brite
KEGG Orthology (KO) [BR:
gdi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GDI2153 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gdi03019
]
GDI2153 (rnc)
03009 Ribosome biogenesis [BR:
gdi03009
]
GDI2153 (rnc)
03036 Chromosome and associated proteins [BR:
gdi03036
]
GDI2153 (rnc)
Enzymes [BR:
gdi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
GDI2153 (rnc)
Messenger RNA biogenesis [BR:
gdi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GDI2153 (rnc)
Ribosome biogenesis [BR:
gdi03009
]
Eukaryotic type
90S particles
RNase
GDI2153 (rnc)
Prokaryotic type
rRNA processing factors
GDI2153 (rnc)
Chromosome and associated proteins [BR:
gdi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
GDI2153 (rnc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
CAP56096
UniProt:
A9HKX5
LinkDB
All DBs
Position
complement(2205800..2206549)
Genome browser
AA seq
249 aa
AA seq
DB search
MTASESGGADGVVASVEARVGYRFRRPDLLREALTHRSAAHQRNGGGARRSRQPAARRGA
GSNERLEFIGDRVLGLVMAEWLLERFPDEQEGALGPRHAHLVSRPVLAAIAGTMNLQQAL
DVAEHEARAGVRQVANVLADAVEAILGAIYLDGGLEPARRFVRAAWNEAIVAQAQPPKDP
KTALQEWVLARGLPLPAYRTVQMDGPSHAPRFVIAVTAAGQSAEGIAGSKRAAESAAAAD
LLRLVDERQ
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgtctgaaagcggtggcgcggacggtgtggtggcgtcggtcgaggcgcgggtc
ggctaccggttccgccgccccgacctgctgcgcgaggcgctgacccatcgctcggccgcc
catcagcgcaatggcgggggcgcgcgccggtcgcgtcagccggccgcgcggcgcggtgcg
gggtcgaacgaacggctggaattcatcggcgaccgggtgctggggctggtgatggccgaa
tggctgctggaacgcttccctgacgaacaggagggggcgctgggtccgcgccacgcccat
ctggtgtcacgtccggtcctggccgccatcgccgggaccatgaatctgcagcaggcgctg
gacgtggcggaacacgaggcccgggcgggcgtgcggcaggtggccaacgtcctggccgac
gcggtcgaggcgatcctgggcgccatctacctggatggcgggctggagccggcccgccgc
ttcgtgcgtgcggcgtggaacgaggcgatcgtggcccaggcgcagcctcccaaggacccc
aagacagccttgcaggaatgggtcctggcgcgcggcctgccgctgccggcctatcggacg
gtgcagatggacgggccctcccatgcgccacgcttcgtcatcgcggtgacggcggcgggc
cagtcggccgagggaatcgccggcagcaagcgcgcggccgaaagtgccgccgccgccgac
ctgctgaggctggttgatgagagacaataa
DBGET
integrated database retrieval system
