Gluconacetobacter diazotrophicus PA1 5 (Brazil): GDI2157
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Entry
GDI2157 CDS
T00631
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase omega chain
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
gdi
Gluconacetobacter diazotrophicus PA1 5 (Brazil)
Pathway
gdi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gdi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GDI2157 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gdi03021
]
GDI2157 (rpoZ)
03400 DNA repair and recombination proteins [BR:
gdi03400
]
GDI2157 (rpoZ)
Enzymes [BR:
gdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GDI2157 (rpoZ)
Transcription machinery [BR:
gdi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GDI2157 (rpoZ)
DNA repair and recombination proteins [BR:
gdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GDI2157 (rpoZ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
PSMD12-CSN4_N
Motif
Other DBs
NCBI-ProteinID:
CAP56100
UniProt:
A9HKY5
LinkDB
All DBs
Position
complement(2210263..2210661)
Genome browser
AA seq
132 aa
AA seq
DB search
MARVTVEDCVERVPNRFELVLLAAQRARGLSRGEELTVDRDNDKNPVVALREIADQTIVL
EQIRSDLVRSLARAPEPEPADEEVMDLIPTEQNIFGLQDVSAEEEASHGTAGMSAEELEA
AIEAELGGRARR
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgtcaccgtcgaagattgcgttgaacgggttcccaaccgattcgaactggtc
ctgctcgccgcacagcgcgcgcgcggcctgtcgcgcggggaagaattgacggtcgaccgc
gacaacgacaagaacccggtcgtggcgctgcgcgaaatcgccgaccagacgatcgtgctg
gagcagattcgcagcgatctcgtccgttcgctggcccgcgcgcccgagcccgagcccgcc
gacgaggaggtcatggacctgatcccgaccgagcagaacatcttcggactgcaggatgtc
tcggccgaggaagaagcatcccacggtactgccggcatgtcggccgaagaactggaagcc
gcgatcgaggccgaactgggcggccgcgcgcgtcgataa
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