Gluconacetobacter diazotrophicus PA1 5 (Brazil): GDI2815
Help
Entry
GDI2815 CDS
T00631
Symbol
recD
Name
(GenBank) putative exodeoxyribonuclease
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
gdi
Gluconacetobacter diazotrophicus PA1 5 (Brazil)
Pathway
gdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GDI2815 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gdi03400
]
GDI2815 (recD)
Enzymes [BR:
gdi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GDI2815 (recD)
DNA repair and recombination proteins [BR:
gdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GDI2815 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
HHH_2
PIF1
NAT10_TcmA_helicase
nSTAND3
TraI_hel_assoc_N
MeaB
NTPase_1
AAA_16
RsgA_GTPase
AAA_29
AAA_22
NPHP3_N
SLFN-g3_helicase
DEAD
ABC_tran
UvrD-helicase
AAA_28
ATP_bind_1
IstB_IS21
AAA
T2SSE
ABC_ATPase
AAA_23
MMR_HSR1
TsaE
NACHT
cobW
NB-ARC
TrwB_AAD_bind
MobB
HHH
Motif
Other DBs
NCBI-ProteinID:
CAP56758
UniProt:
A9HQK8
LinkDB
All DBs
Position
complement(2896416..2898602)
Genome browser
AA seq
728 aa
AA seq
DB search
MSGRAIDSSPTEALAGLVERVTFHNAENGFCVLRVKVRGQRDLVTVVGHAAMISAGEFVQ
MSGRWFNDHTHGLQFKAEFLKASPPTTVEGIERYLGSGMIRGIGPVYAKKLVKAFGEAVF
DLIEQEPHRLREVTGIGPKRAERIVGGWADQKVIREIMLFLHSNGVGTSRAVRIFKTYGQ
DAVQLISENPYRLAKDIRGIGFKTADQIARKMGIAPDAMIRVRAGISYALGEAMEEGHCG
LPVGELLTSTAELLEVAAPLIETALALELEAGDVVADSVGDTDCIFLAGLYRAERSIAER
LRACAVGRPPWPEIDAAKAMTWVEGKTGLALAPSQQEAVRLALRSKVLVITGGPGVGKTT
LVNAILKIVTAKGTDVQLCAPTGRAAKRLSESTGLEGKTIHRLLETDPANGSFKRDDTNP
LTCDLLVVDEASMVDVLLMRSLLRALPDSAALLIVGDVDQLPSVGPGQVLADIIGSDAVP
VVRLTEVFRQAAQSRIITNAHRINEGKMPDLSAEEGSDFYFVEAAEPEAGLRKLLAVVKD
RIPARFGLDTVRDVQVLCPMNRGGLGARSLNIELQQALNPPGEVKVERFGWTYGPGDKVM
QIANDYDRDVFNGDLGVIDMIDVEEGELTVLFDGREVVYGFGELDELVLAYATTIHKSQG
SEYPAVVIPLVTQHYAMLARNLLYTGVTRGRKLVVLVGQKKALAIAVRNQGGRRRWSKLR
EWLAGSVA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgagcggacgtgccatcgactcttcgcccacggaagcgctggcgggactggtcgagcgg
gtgacgttccataatgccgagaacggcttctgcgttctgcgggtgaaggtgcggggacag
cgcgatctggtcaccgtcgtcggccatgccgccatgatctcggcaggcgagttcgtgcag
atgtcggggcgctggttcaacgaccacacccacggcctccagttcaaggccgagttttta
aaggccagcccgccgaccacggtcgagggcatcgagcgctatctgggctcaggcatgatc
cggggcatcggtccggtctacgccaagaaactggtgaaagcgttcggcgaggcggtgttc
gacctgatcgaacaggaaccgcaccgcctgcgggaggtgacgggtatcggccccaagcgt
gccgaacggattgtcggtggctgggcggaccagaaggtgatccgcgagatcatgctgttc
ctgcacagcaatggtgtcggcacctcgcgggcggtgcggatcttcaagacctacggacag
gacgcggtccaactgatcagtgagaacccctaccggctggcgaaggacattcggggtatc
gggttcaagaccgctgaccagatcgcccggaagatggggatcgcgcccgacgccatgatc
cgggtacgggccgggatttcctatgcccttggcgaggcgatggaagaggggcattgcggt
ctgccggtcggggagctgctgaccagcaccgccgaactgctggaggtcgcggcacccctg
atcgagacggcgctcgcgctggaactggaagcaggggacgtggtcgccgacagcgtgggc
gatacggactgcattttcctggctggtctctatcgcgcggagcggagcattgcggagcga
ttgcgtgcctgtgccgtgggtcgaccgccctggcccgagatcgacgctgcaaaagccatg
acctgggtcgaaggcaagactgggcttgcgctcgcgcccagccagcaggaggcggtgcgc
cttgccctgcgcagcaaggtgctggtgatcacgggggggcccggtgtcggcaagaccacg
ctggtcaacgccatcctcaagatcgtgaccgccaagggcacggacgtgcagctttgtgcg
ccgacgggccgcgcggcgaagcgcctgtcggaaagcaccggactggaaggcaagaccatc
catcgactgctggagacggatccggcgaatggcagtttcaaacgggacgacaccaacccg
ctgacctgcgatctgctggtcgtggacgaggccagcatggtggacgtgctgctgatgcgc
tccctgctgcgcgcgttgcccgacagtgcggcgctgctgatcgtgggggacgtggaccag
ttgccgtcggtcggaccggggcaggtgctggcggatatcatcggttcagatgccgtgccg
gtggtgcggctgaccgaggtgttccgccaggcggcgcagagccggattatcaccaatgcg
caccggatcaacgaagggaagatgccggatctgagcgcggaagagggatcggatttctat
ttcgtggaggcggccgagcccgaggctgggctgcgcaagttgctggccgtggtgaaggac
cgcatcccggcgcggttcgggctggacacggttcgcgacgtgcaggtgctgtgcccgatg
aaccggggcggccttggggcgcgatcgctgaatatcgaattgcagcaggcgttgaatccg
ccgggcgaggtgaaggtcgagcggttcggctggacctatggtcccggcgataaggtgatg
cagatcgccaatgattatgaccgggacgtcttcaacggggatctcggcgttatcgacatg
atcgatgtggaagagggcgaactgacggtcttattcgatggacgggaagtcgtttatggc
tttggggaactggatgaactggtgctcgcctatgccaccacgatccacaagagccaggga
tccgaatatccggccgtggtgatcccgctggtgacccaacattacgccatgctggcgcgg
aacctgctctataccggcgtcacacggggacggaagctcgtcgtgctcgtgggccagaag
aaggcgctggcaatcgctgtgcgcaatcagggcgggcggcggcggtggtcgaagctcagg
gagtggctggccggtagcgttgcatga
DBGET
integrated database retrieval system
