Gluconacetobacter diazotrophicus PA1 5 (Brazil): GDI3380
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Entry
GDI3380 CDS
T00631
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gdi
Gluconacetobacter diazotrophicus PA1 5 (Brazil)
Pathway
gdi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gdi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GDI3380 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gdi03021
]
GDI3380 (rpoA)
03400 DNA repair and recombination proteins [BR:
gdi03400
]
GDI3380 (rpoA)
Enzymes [BR:
gdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GDI3380 (rpoA)
Transcription machinery [BR:
gdi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GDI3380 (rpoA)
DNA repair and recombination proteins [BR:
gdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GDI3380 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
Motif
Other DBs
NCBI-ProteinID:
CAP57323
UniProt:
A9H3I9
LinkDB
All DBs
Position
complement(3486081..3487100)
Genome browser
AA seq
339 aa
AA seq
DB search
MVLQKNWQSLIKPEKLEVEPGGEPLRTATVVAEPLERGFGMTLGNAIRRVLLSSLQGAAV
TAIQIDGVLHEFSSVAGVREDVTDIVLNVKQLALRMHGEGPKRMVLTATGPGEVRAGQIQ
TGHDIEVMNPDLVICTLDEGVKFGMEFTVNLGKGYVPAAANRPEDAPIGLIPVDAIYSPV
RRVSYKVEPTRVGQVTDYDRLLLTVETNGAVTPEDAVALAARILQDQLQLFINFDEPRPV
RTEEPQDDLPFNRNLLRKVDELELSVRSANCLKNDNIVYIGDLVQKTEQEMLRTPNFGRK
SLNEIKEVLTSMGLSLGMNVPAWPPENIEDLAKRLDEPF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
ttggtcctccagaaaaactggcaatctctgatcaagccggagaagctggaagtcgagccg
ggcggagagccgttacgcacggcgaccgtggtggcggagccgctggagcgcggcttcggc
atgacgctcggcaacgccatccggcgcgtgctgctgtcctcgctgcagggcgcggcggtg
acggcgatccagatcgacggcgtcctgcacgagttctcgtccgtggccggcgtccgcgag
gacgtcaccgacatcgtgctgaacgtcaagcagcttgccctgcggatgcatggcgagggg
ccgaagcgcatggtgctgacggccaccgggccgggtgaagtgcgggcgggccagatccag
accgggcatgatatcgaagtcatgaatcccgacctggtgatctgcacgctggacgagggc
gtgaagttcggcatggaattcaccgtgaacctgggcaagggctacgtcccggcggcggcg
aaccgtcccgaggacgcgccgatcggcctgattccggtcgatgccatctattcgccggtg
cgtcgcgtgtcctacaaggtcgagccgacccgcgtgggccaggtgaccgattatgaccgg
ctgctgctgacggtggaaaccaacggcgcggtgacgcccgaggatgcggtggccctggcc
gcgcgtatcctgcaggaccaactgcagctgttcatcaatttcgacgagccgcgtccggtc
aggaccgaagagccgcaggacgacctgccgttcaaccggaacctgctgcgcaaggtcgac
gaactggaactgtcggtccgcagcgcgaactgcctgaagaacgacaacatcgtctatatc
ggcgacctggtgcagaagaccgagcaggagatgctgcgcactccgaacttcggtcgcaag
tcgctgaacgagatcaaggaagtcctgacttcaatggggctgtcccttggtatgaatgtg
ccggcctggccgccggaaaatatcgaagacctggccaagaggctcgacgagccgttctga
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