Gluconacetobacter diazotrophicus PA1 5 (Brazil): GDI3519
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Entry
GDI3519 CDS
T00631
Symbol
xseA
Name
(GenBank) putative exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
gdi
Gluconacetobacter diazotrophicus PA1 5 (Brazil)
Pathway
gdi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GDI3519 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gdi03400
]
GDI3519 (xseA)
Enzymes [BR:
gdi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
GDI3519 (xseA)
DNA repair and recombination proteins [BR:
gdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GDI3519 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Nbl1_Borealin_N
Motif
Other DBs
NCBI-ProteinID:
CAP57462
UniProt:
A9H4N9
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All DBs
Position
complement(3619900..3621480)
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AA seq
526 aa
AA seq
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MFPSARSDQQHPHPIRSNSSRPAWFILRLPGTPSLSYPVAMDEPLRDSGTAGAGNVPEYS
VSEISGAIRRTLEGTFGRVRVRGEITEFKRYPSGHLYFSLKDEGGKISSVVWRGSVSRLG
LKPENGVEVVATGKISSYGERSSYQLIIDRLDYAGEGALLARIERLRLKLAAEGLFDAAG
KRALPFLPDVIGVVTSAQGAVMHDIRTTIARRFPRRLLVWPVAVQGEAAAAQIAAAIAGF
DAIDGRGPIPRPDVLIVARGGGSLEDLMAFNDEVVLRAAAACRIPLISAVGHETDTTLID
FVSDRRAPTPTAAAELAAPARAELVADLGHRAARLTSGLARLTQTLRLRLDRAAARLPDL
PSLLGTARMRLDDRGHRLDMALPALVARRRAALLAVERAMPSASLLTGPRRARLALAASH
LQSGLRQALRDGHARADRTRLRPAPLAAMLRERRAHLAGLAGRLESLSPMAVLERGYVLV
RDPAGVPVTRAADVRPGGRLVLIFADGEAAVRADRSGEAAQGRLDI
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgtccgcccgatccgaccagcagcacccgcatcccatccgctccaacagttca
cgcccggcctggttcatactcaggcttccggggacgccgtctctatcataccctgtggcg
atggacgaacctcttcgcgactccggcacggccggggcgggcaacgtgcccgaatattcg
gtctccgagatttcgggggcgatccggcgcacgctggagggcacgttcggccgggtgcgc
gtgcgcggcgagatcacggaattcaagcgctatccgtccgggcatctctatttctcgctg
aaggacgagggggggaagatctcctcggtggtgtggcgcgggtcggtgtcgcggctgggg
ctgaagccggaaaacggggtcgaggtcgtggcgacgggcaagatctcgtcctatggcgaa
cgctcgtcctaccagttgatcatcgaccggctggactacgcgggcgagggcgcgctgctg
gcgcggatcgagcggctgcggctgaagctggcggcggaggggctgttcgacgcggcgggc
aagcgggcgctgccgttcctgcccgacgtgatcggcgtggtgacgtccgcccagggggcg
gtgatgcacgatatccgcaccaccatcgcgcggcgctttccccgccggctgctggtctgg
ccggtcgcggtgcagggcgaggcggcggccgcgcagatcgccgccgccatcgcggggttc
gacgccatcgacggcagggggccgatcccgcgccccgacgtgctgatcgtcgcgcgcggc
ggcgggtcgctggaagacctgatggccttcaacgacgaggtggtgctgcgggcggcggcg
gcgtgccgcattccgctgatttccgccgtggggcacgaaaccgacaccacgctgatcgat
ttcgtgtcggaccggcgcgcgcccacccccacggcggcggccgaactggcggccccggcc
agggccgagctggtggccgatctggggcatcgcgcggcccggctgaccagcgggctggcg
cgcctgacgcagacgctgcggctgcggctggaccgggcggcggcccgtctgcccgacctg
ccgtcgctgctgggcacggcgcggatgcggctggacgatcgcggccaccggctggacatg
gcgctgccggcgctggtcgcgcggcggcgcgcggcgctgctggcggtggaacgggccatg
ccgtccgccagcctgctgaccggcccgcgccgggccaggctggcgctggcggccagccac
ctgcaatccggcctgcgccaggccctgcgcgacgggcacgcgcgggcggacaggacgcgc
ctgcgcccggccccgctggcggcgatgctgcgcgagcggcgtgcccacctggccgggctg
gccgggcggctggagtcgttgtcgcccatggcggtgctggaacgcggctatgtcctggtg
cgcgacccggcgggggtgcccgtcacccgcgccgccgacgtccgtccgggcggccggctg
gtgctgatcttcgcggatggcgaggcggcggtgcgcgccgacaggtccggcgaggccgcc
caggggcggctggatatctga
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