Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_0206
Help
Entry
Gdia_0206 CDS
T00798
Name
(GenBank) outer membrane autotransporter barrel domain protein
Organism
gdj
Gluconacetobacter diazotrophicus PA1 5 (JGI)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AAL_decarboxy
Motif
Other DBs
NCBI-ProteinID:
ACI50004
LinkDB
All DBs
Position
219752..223609
Genome browser
AA seq
1285 aa
AA seq
DB search
MRVSVSSLAILCALRLALPHQASAQTVVVTSPLTGASNFNAGGADGTSGAGGTGTGVGGG
TGGSSSGNNAAGGSVGGSSAGYGGTGFGGGGGGGAGGQIGNQGNGAGGGGGLDGSVSNGS
AGGGAGGGVGTTVTAGSWTNNSSVSGAYGGNGGNGAPVMNSGGGGGGGAGVYASGSGSGS
VTLINNAGAAIRGGFGGEYAGFGVNTTGIGGGGGGGTGVAGSNFTLTNAGTIAGGGGGYG
YTGGSGGNGVGGTNFNLSNSGNVTGGNGYNGSLGGTGVAGSGFTLTNSGTIAGGLGGGSG
GSGVAGSGFTLTNSGTITGGNGNYFTPTPTGGNGGTGVTGSGFSLTNTATVTGGNGSSGF
DFDSGNGGNGGSGVAGSSFTLANSGAITGGNGGDGGDGGDGGDGGNDSYGQDSHNSNGNG
GHGGGGVTGSGFTLTNTGTITGGDGGSGDGDGKGIDGSGGVGVTSTGGSTIVTSGQISGG
VSAAGVQADAVDLSGGGNTLKLESGYGFTGNVVSTSGTTNGGDTLELGGTANGTFNLSQI
VTTTPTSWTGTVQYSGFDRFLVTDSAVWTLTGSTNAVSIAASMQINNGATLQFDNGAAGI
SLAGTFTDNGILTIGGSAAAASLAGTGTANLAGILTLTNAADRFSGTIQGTGGLTIAGGN
ETLTGANTYSGGTTIEAGTLTVGSNTALGTGVLDMAQGTALAFGTNGLTLGNAIVLNGDP
TVEIDSGTDTLAGTISDGATPGDLVKTGAGTLVLAGNSTYSGGTEVAAGTLQVDGAIASP
VTVDTAGTLAGAGTIGTTTVSGTLAPGDAGVGTLHVNGNLTMAAGSTYQVDVTPAAALGH
VAVTGAATLQGGTVAVTAGAGNWTTTRYTILTAGGGVTGQFAGVLTNLAFLTPTLAYDSD
DVFLSLRRNTLDFAGVATTRNEVAAGNGLSGTTSGALYDALVQTDAATARHALNSLSGEL
HASARTALVQDSYYVRDAAVERLRGVECAPGAASGMKTAAGGKPTDGACQPDRASVWMQD
YGSFGHNGGNGNAAGMGHSVGGFVLGADAPVLGWQVGGLVGYGHSSFDSGAVSSYGHSSN
VSLGLYAGTHWGRLALRTGATYSWNMLSTTRNVGFTGFSNRLNTDYDGGTAQAFGDLGYR
LDAGPAMIEPFANVAYVNLHTNGYIEHGGPAALAGRAMDTGVTYSTFGARFAGTVRVGGV
ALTPNATLGYRHAFGLTTPTTREAFLAGGNAFDVAGVPLSTDAAVLKAGLQAKLTDRLNV
GLSYVGQYGDHSTDSGLTGNVKVTF
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtgtctcggtctccagcctggccatcctctgcgccctccggctggccctgccccat
caggcgtcggcccagaccgtggtcgtgacctctcccctgacgggcgcttcgaacttcaat
gccggtggtgcggacggaacgtcaggcgccggcggcacgggcaccggtgtcggcggcggt
acggggggatcttcttctggaaataatgccgcggggggcagcgtcggtggttcttccgcc
ggctatggcgggaccggcttcggcggtggtggtggcggcggcgcgggcggccagatcggc
aatcagggcaatggcgccggcggcggtggcggcctcgacggcagcgtcagtaacgggagc
gctggcgggggtgctggcgggggcgtcggcacgacggtgacggcgggtagctggaccaac
aattcctctgtttccggtgcttatggcggcaatggcggcaatggcgcgccggtcatgaac
agcggcggcggcggcggtggcggcgcgggcgtctacgcctcgggctctggttctggttcg
gttacgttgatcaataatgccggtgcggccattcggggcggcttcggcggcgagtacgcc
ggattcggcgtcaacaccacgggcattggcggcggcggcggcggcggaaccggcgttgcc
ggtagcaacttcaccctgaccaacgccggtaccatagccggtggcggcggtggatacggc
tacaccggcggcagcggcggcaacggtgtcggcggtacaaacttcaacctgtcgaactcc
ggcaacgtgacaggcggcaatggctacaacggcagccttggtggcaccggcgttgcgggc
tccggcttcaccctcaccaactcgggcacgatagcaggcggcctcggcggcggaagcggt
ggaagcggcgttgccggcagcggcttcaccctgaccaattccggcaccataacgggcggc
aatggcaattatttcacccctacccccactggcggcaacggcggaaccggcgttaccggc
agcggtttcagcctgaccaacaccgccaccgtaacaggcggcaatggcagcagcggcttt
gacttcgacagcggcaacggtggcaacggcggaagcggcgttgccggcagcagcttcacc
ctggccaattccggcgccataacgggcggcaacggcggcgacggcggcgacggcggcgac
ggcggcgacggcggcaatgacagctatggccaggatagccataacagcaacggcaatggt
ggtcatggcggcggcggcgtcaccggcagcggcttcaccctgaccaatacgggtaccata
acgggcggcgatggcggcagtggcgacggcgacggcaagggcatcgatggaagcggcggg
gtcggcgtgaccagcacggggggatcgacgatcgtcacctccggccagatcagcggcggt
gtctccgctgccggtgtgcaggccgatgccgttgacctcagcggtggcggcaacacgctg
aaactggaaagtgggtatggctttaccggcaatgtcgtcagcaccagtggcaccacgaat
gggggcgacaccctggaattgggcggcacggccaacggcacgttcaacctgtcgcagatc
gtcacgacaacgccgacatcctggaccggaaccgttcaatattccggattcgacaggttt
cttgtgaccgattcggcggtatggacgctgaccggatcgacgaatgccgtctccatcgcc
gcgtcgatgcagatcaacaacggtgcaacgctccagtttgataacggcgccgccggcata
tcgctcgcgggcacctttaccgacaatggaatcctgaccatcgggggcagcgccgccgcc
gcctcgctggccggtaccggcaccgccaatcttgccggcatcctgaccctgaccaacgcc
gccgatcgtttcagcggcaccatccagggaaccggcggcctgaccattgcggggggtaac
gagacgctgaccggtgccaacacctacagcggtggcacgacgatcgaggccggcaccctg
acggtgggaagcaatacggccctgggaaccggggtgctggacatggcacagggcacggcg
ctggccttcggaacgaatggcctgacgctgggcaatgcgatcgtcctgaacggcgacccg
acggtcgagatcgacagcggcaccgacaccctggccggcacgatcagcgacggcgcaacg
ccgggggacctggtcaagaccggggccggcacgctggtgctcgcgggcaacagcacctat
agcggcggcaccgaagtcgcggccggcacgctgcaggtcgacggcgcgatcgccagtccg
gtgactgtggatacggcgggcacgctggcgggcgccggcaccatcggcaccaccaccgtc
tccggcacgctggcgccgggtgatgccggcgtgggtacgctgcatgtgaacggcaacctg
accatggcagcgggctcgacctatcaggtggacgtgacgccggcggcggcgctgggacat
gtggcggtcaccggtgccgccacgctgcagggcggcacggtcgcggtcacggcgggtgcg
ggaaactggacgaccacgcgctacaccatcctgacggcgggcggcggggtaaccggacag
tttgccggcgtgctgacgaatctggccttcctgacaccgaccctggcctatgattccgac
gacgtgttcctgagcctgaggcgcaacacgctggatttcgcgggcgtcgccaccacgcgc
aacgaggtcgcggccggcaacgggctgtccggcacgaccagcggtgccctgtatgacgcg
ctggtgcagaccgacgcggccacggcgcggcacgcgttgaacagcctgtcgggtgaactc
cacgcctcggcgcgcaccgcgttggtccaggacagctattacgtgcgcgacgccgcggtc
gaacggctgcgcggcgtggagtgcgcgccgggtgccgccagcggcatgaaaaccgccgcc
ggaggaaagcccaccgacggcgcctgccagccggaccgggcatcggtgtggatgcaggat
tacggctcgttcgggcataatggcggcaacggcaatgccgccgggatgggccattcggtc
ggcggcttcgtgctgggcgcggatgcgccggtgctgggctggcaggtcggcggcctggtc
ggctacggccattcctcgttcgacagcggggcggtgtcctcgtacgggcacagcagcaat
gtcagcctgggcctgtatgccggcacccactggggccgcctggccctgcgcacgggggcg
acctatagctggaacatgctgtccaccacccgcaatgtcgggttcaccgggttctccaac
cggctgaacaccgactatgacggcggcaccgcgcaggccttcggcgacctgggctatcgc
ctcgatgccggcccggcgatgatcgagcccttcgcgaacgtcgcctatgtcaacctgcac
accaacggctacattgagcatggcggcccggcggcgctggccggccgggccatggatacc
ggcgtcacctactcgaccttcggggcgcggttcgccggcacggtccgggtgggcggcgtc
gcgctgacgcccaatgcgacgctgggctatcgccacgccttcggcctgaccacgccgacc
acgcgcgaggcgttcctggccggcggcaacgcgttcgacgtcgcgggcgtgccgctgtcc
accgacgcggcggtgctgaaggcggggctgcaggcgaagctgaccgacaggctgaatgtc
ggcctctcctatgtcgggcagtatggcgaccactccaccgacagcggcctgaccggtaac
gtcaaggtcacgttctga
DBGET
integrated database retrieval system
