Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_0446
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Entry
Gdia_0446 CDS
T00798
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
gdj
Gluconacetobacter diazotrophicus PA1 5 (JGI)
Pathway
gdj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gdj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Gdia_0446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gdj03400
]
Gdia_0446
Enzymes [BR:
gdj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Gdia_0446
DNA repair and recombination proteins [BR:
gdj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Gdia_0446
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ACI50242
LinkDB
All DBs
Position
490317..491093
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AA seq
258 aa
AA seq
DB search
MKIASWNVNSVRQRQAHVLDWLEREKPDLLGLQEIKCEDAAFPAEAFRAAGYDCVVVGQK
SYNGVAILSRLPFSVTARALPFLDGEALQARYVEIEAGGLTFGNLYLPNGNSGGSAGYEA
KLAFMEALALHARALLEAGRDFVLAGDYNVCPTDEDCAPGALPPTDALVRPESRAAFRRL
IWLGLTDALRALHPHGRYYTFWDYQAGAWPRDCGLRIDHALLSPRIAERLDSAQPDRDER
GRAQPSDHVPLVITLDGP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgcaagctggaacgtcaattcggtccgccagcgccaggcgcatgtcctggac
tggctggagcgggaaaagcccgacctgctcggccttcaggaaatcaagtgcgaggacgcg
gcctttcccgccgaggccttccgcgcggcgggatatgactgcgtggtcgtggggcagaaa
agctataacggcgtcgccatcctgtcgcgcctgcccttttccgtcacggcgcgggccctg
ccgttcctggacggcgaggcgctgcaggcgcgctatgtggaaatcgaggccgggggcctg
accttcggcaacctgtatctgcccaacggcaattccggcggcagcgcgggctacgaggcc
aagctggcgttcatggaggcgctggccctgcacgccagggcgctgctggaggccgggcgg
gatttcgtcctggcgggcgattacaatgtctgccccaccgacgaggattgcgcgccgggc
gccctgccgcccaccgacgcgctggtcaggccggaatcgcgcgcggccttccgccgccta
atctggctgggcctgacggatgcgctgcgggcgctgcacccgcacgggcggtactacacg
ttctgggactaccaggccggtgcgtggccgcgcgattgcgggctgcggatcgaccacgcc
ctgctgtcgccgcgtatcgcggaacggctcgacagcgcccagcccgaccgggacgagcgc
ggccgcgcccagccgtccgaccacgtgccgctggtcatcacgctggacggaccctga
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