Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_0580
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Entry
Gdia_0580 CDS
T00798
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
gdj
Gluconacetobacter diazotrophicus PA1 5 (JGI)
Pathway
gdj00550
Peptidoglycan biosynthesis
gdj01100
Metabolic pathways
gdj01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
gdj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Gdia_0580
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Gdia_0580
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gdj01011
]
Gdia_0580
Enzymes [BR:
gdj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Gdia_0580
Peptidoglycan biosynthesis and degradation proteins [BR:
gdj01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Gdia_0580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ACI50372
UniProt:
A9HM91
LinkDB
All DBs
Position
complement(647342..649246)
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AA seq
634 aa
AA seq
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MIRRRKTATRLMSRPDTGNPSRGVFTRRALVVLGAQMAALGALGHRLYGLQVLDGDHYAK
LAENNRVNRSLIAPPRGRVVDRFGIAVASNKVNWRALLLPEDTSDISGTLDRFSALVPIE
ARDRARIEREMRHKRRFIPIMLHDFLSWDDMARIELNAPSLPGVLIDVGTTRNYPFGPLM
AHVVGYVAPPGEKDVTADATMALPGMRIGRSGIEQTQDTLLRGQVGAVEIEVNAVGRVMA
ELSRDDGQAGDEITLTIDSGLQQAVLGRIADQSASAVVMDCRNGEVLAMVSNPSFDPSLF
DSGVSQAQWVEWTNNQGTPLINKAVAGVYPPGSTFKPAVAMAALQAGTLSPTDRIFCPGY
LDVGGTRFHCWSRYGHGSLTLKDGLKFSCDVFFYEAARRTGMDAIAAASHAFGLGTHLDI
ELPHTRQGLIPTPDWRRAHGQHWNGGDTIVSGIGQGFVQVTPLQLATYASRIASGRAVQP
HLVRAVAGKLAEGTDPTHWPALGMPDPFLGQLRAGMFAVINEEHGTAPKARLDIPGVQMA
GKTGSAQVRRVSRALRESGHFDSSALPWEYRPHALFICYAPYDAPRYAVSVVVEHGNAGA
AVAAPLARDIMTDALTRDPANRKEPPGQVVADIE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgatccggcgcaggaaaaccgccacccgcctgatgtcgcggcccgataccgggaatccg
tcgcgcggggtcttcacccggcgcgcgctggtggtgctgggggcgcagatggcggcgctg
ggcgcgctggggcaccggctgtacggactccaggtgctcgacggcgaccattacgccaag
ctggcggaaaacaaccgcgtcaatcgcagcctgatcgccccgccgcgcggccgggtggtc
gaccggttcggcattgccgtggcgtcgaacaaggtcaactggcgcgcgctgctgctgccc
gaggacaccagcgacatctccggcacgctggaccggttttccgccctggtgcccatcgag
gcccgcgatcgcgcgcgtatcgagcgcgagatgcggcacaagcggcgcttcatcccgatc
atgctgcacgacttcctgtcgtgggacgacatggcgcggatcgaactgaatgcgccctcg
ctgcccggcgtgctgatcgatgtcgggaccacccgcaactatccgttcgggccgctgatg
gcccatgtcgtgggctatgtcgcgccgccgggcgaaaaggacgtgacggccgacgcgacg
atggccctgccgggaatgcgcatcggccggtcgggaatcgagcagacgcaggataccttg
ctgcgcggccaggtgggcgcggtggagatcgaggtcaacgccgttggccgcgtcatggcc
gaactgtcgcgcgatgatgggcaggccggcgacgaaatcaccctgaccatcgattcgggc
ctgcagcaggcggtgctggggcgcatcgccgaccagtcggccagcgccgtggtgatggat
tgccgcaatggcgaggtgctggccatggtcagcaacccgtccttcgacccctcgctgttc
gacagcggcgtcagccaggcgcaatgggtcgaatggaccaacaaccagggcacgccgctg
atcaacaaggcggtcgcgggcgtctatccccccggctcgaccttcaagcccgccgtggcc
atggcggccctgcaggccggcacgctgtcgccgaccgaccggatcttctgtcccggctac
ctggatgtgggcggcacgcgcttccattgctggtcgcgttacggccacggatcgctgacg
ctgaaggacgggctgaaattctcctgcgacgtgttcttctacgaagccgcgcggcggacc
ggcatggacgccatcgccgcggcgtcgcacgcgttcggcctgggcacgcacctggatatc
gaactgccgcacacccgccagggattgatcccgaccccggactggcggcgggcgcacggc
cagcactggaatggcggcgatacgatcgtcagcggcatcgggcagggattcgtgcaggtc
acgccgctccaactcgccacctatgcatcgcggatcgccagcgggcgggcggtgcagccg
catctggtccgcgcggtcgcgggcaagctggcggagggcacggaccccacgcactggccg
gcgctgggcatgcccgatccgttcctggggcagttgcgcgccggcatgttcgccgtgatc
aacgaggaacacggcaccgcgcccaaggcgcgcctggatattccaggcgtccagatggcc
ggcaagaccgggtccgcgcaggtgcgtcgcgtgtcgcgcgccctgcgcgaaagcgggcat
ttcgattcctccgccctgccgtgggaatatcgcccgcatgcgctgttcatctgctatgcg
ccctatgacgcgccgcgctatgcggtttcggtggtggtggaacacggcaatgcgggcgcc
gcggttgcggcgccgctggcccgcgatatcatgaccgatgcgctgacccgcgacccggcg
aaccgcaaggaaccgccgggccaggtggtggccgacatcgaatag
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