Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_0603
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Entry
Gdia_0603 CDS
T00798
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
gdj
Gluconacetobacter diazotrophicus PA1 5 (JGI)
Pathway
gdj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gdj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Gdia_0603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gdj03400
]
Gdia_0603
Enzymes [BR:
gdj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Gdia_0603
DNA repair and recombination proteins [BR:
gdj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Gdia_0603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
SH3_HelY
AAA_30
HTH_20
nSTAND_NTPase5
HTH_IclR
MarR_2
Zn_ribbon_6
AAA_19
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
ACI50395
LinkDB
All DBs
Position
674986..677265
Genome browser
AA seq
759 aa
AA seq
DB search
MAVSIGAQEMRVGPPAAGLLKQPPTGRPRVAVLLPLPFPGPFDYAAPPDLPAPPLQPGDI
VTVPLGRRTETGVVWDPERNLPPEFTPPPMKSVADGRLKPVIARLDQPPLPASLRRFVDW
VAAYTLSPPGLVLAMALRTGTAAQAAPALGWAVADPPPGLRDTPARRRVLDIAAHDGPLT
AAELARRAGVGTSVVRGLADAGALRGVTMTPRPAFVRPDPDHCPPALDGEQAESARALRA
LAAEGGFSVTLLEGVTGSGKTEIYMEAIAACLARGKQVMVLLPEIALSSQWTGRFARRFG
AEPALWHSDLGPRLRRVTWHAVADGTARVVVGARSALFLPFAELGLIIVDEEHETAFKQE
DGVTYHARDMAVVRARMDRAPVVLVSATPSLETLANVGAGRYRHLVLTARHGGATMPEVR
TIDMRAHPPERGLFLSPVLTEAIRQAIGRGEQGMLFLNRRGYAPLTLCRTCGHRLQCPNC
TAWLVEHRARQILTCHHCGYQEATPPACPECHAESSLTPIGPGVERITEEARATFPDARI
LVMASDTLPGPAATADAVARIARREIDLVIGTQIVAKGWHFPHLTLVGVVDADLGLGGGD
LRAAERTVQLLHQVAGRAGRAEAPGTVLLQSYTPDHPVMLALVSGDFESFMRQEAEQRRP
GFWPPFGRLAALIVSADTPEAADATARALGQAAPRGDSLQVLGPAPAPLAILRGRHRRRL
LLRTRREVAVQPLLRQWLDRVTPERGARIDIDIDPVSFL
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgagcatcggagcgcaggaaatgcgcgtcggaccgccagcagcggggcttttg
aagcagcctccgaccggccggccgcgtgtcgcggtcctgctgcctctgcccttccccggc
ccgttcgactatgccgcaccgccggacctgcccgcccccccgctgcaacccggcgacatc
gtcaccgtgccgctggggcggcgtaccgaaaccggcgtggtctgggacccggagcgcaac
ctgccgcccgaattcaccccgccccccatgaagagcgtggcggacggacggctgaagccc
gtcatcgcgcggctggaccagccgcccttgccggcctcgctgcgccgcttcgtcgactgg
gtcgcggcctatacgctttcccccccggggctggtgctggccatggcgctgcgcaccggc
accgccgcccaggccgcccccgcgctgggctgggccgttgccgatccgccgccgggcctg
cgcgacaccccggcacggcgaagggtgctggacatcgccgcgcatgacgggccgctgacc
gccgccgaactggcccgccgtgccggggtcggcaccagcgtggtgcgcggcctggcggat
gccggggcgctgcgcggggtaacgatgacgccgcgccccgccttcgtgcggcccgatccg
gaccattgccccccggcactggacggcgagcaggcggaatcggcccgggccctgcgtgcc
ctggcggcggagggcggcttttccgtcaccctgctggaaggagtgaccggatcgggcaag
accgagatctacatggaggccattgccgcctgcctggcgcgcgggaagcaggtgatggtg
ctgctgccggaaatcgccctgtcctcgcaatggaccgggcgtttcgcccgccgcttcggg
gcggagcccgcgctgtggcattccgacctggggccgcgcctgcgccgcgtcacctggcac
gcggtggccgacggcacggcgcgggtggtggtgggcgcgcgctcggccctgttcctgccc
ttcgcggaactggggctgatcatcgtggacgaggaacacgagaccgcgttcaagcaggaa
gacggcgtgacctaccacgcgcgcgacatggccgtggtgcgggcgcgcatggaccgcgcg
ccggtcgtcctggtctcggccacgcccagcctggagaccctggccaatgtcggggccggc
cgctaccgccatctggtgctgaccgcgcgccatggcggggcgacgatgcccgaggtgcgc
accatcgacatgcgcgcccatccgcccgaacggggactgttcctctcgccggtgctgacc
gaggccatccggcaggcgatcgggcgcggcgagcaggggatgctgttcctcaaccggcgg
ggctatgcgccgctgaccctgtgccgtacctgcggccaccgcctgcaatgcccgaactgc
accgcctggctggtggaacatcgcgcgcggcagatcctgacctgccatcattgcggctat
caggaagcgacaccgcccgcctgccccgaatgccacgccgaatccagcctgacgccgatc
ggccccggcgtggagcgcattaccgaggaagcgcgcgccaccttccccgatgcgcgcatc
ctggtgatggccagcgacaccctgcccggccccgccgccaccgccgacgccgtggcgcgg
atcgcgcggcgcgagatcgacctggtgatcggcacgcagatcgtggccaagggctggcat
tttccgcatctgacgctggtcggtgtcgtcgatgccgacctgggcctgggcggcggcgac
ctgcgcgcggcggaacgcacggtgcagttgctgcatcaggtcgccggccgcgccggccgt
gccgaggccccggggacggtgctgctgcagagctacacccccgaccatccggtgatgctg
gcgctggtgtcaggcgatttcgagagtttcatgcgccaggaggccgagcagcgccgcccc
ggcttctggccccccttcggccggctggccgccctgatcgtcagcgcggatacgccggag
gccgccgacgccaccgcccgggccctgggtcaggcagcgccccggggcgacagcctgcag
gtgctgggcccggcccccgcgccgctggccatcctgcgcggccgccaccgcaggcgactg
ctgctgcgcacgcggcgcgaggtcgcggtccagcccctgctgcggcaatggctggaccgc
gtgacgcccgaacgcggggcccggatcgacatcgatatcgatccggtctcgttcctttag
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