KEGG   Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_1013
Entry
Gdia_1013         CDS       T00798                                 
Name
(GenBank) P-type conjugative transfer ATPase TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
gdj  Gluconacetobacter diazotrophicus PA1 5 (JGI)
Pathway
gdj02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:gdj00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Gdia_1013
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gdj02044]
    Gdia_1013
Enzymes [BR:gdj01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Gdia_1013
Secretion system [BR:gdj02044]
 Type IV secretion system
  Trb secretion system protein
   Gdia_1013
SSDB
Motif
Pfam: T2SSE AAA_16 TrwB_AAD_bind Zeta_toxin FtsK_SpoIIIE DEAD AAA_7 nSTAND3 AAA_19 AAA_30 CbiA AAA_28 DUF815 MobB ATPase MMR_HSR1 AAA_29 AAA_22 CLP1_P AAA_25 Dynamin_N IstB_IS21 GTP_EFTU P-loop_TraG Septin TsaE AAA_11 Parvo_NS1 ABC_tran ResIII
Other DBs
NCBI-ProteinID: ACI50796
LinkDB
Position
complement(1139516..1140484)
AA seq 322 aa
MSVAPFRSEAVARGTRMLRTALGLAIAGHLDDPSIVEVMLNPDGRLWIDRLAGGMEDTGT
RITPADAERIVRLVAHHVGVEVHPASPRVSAELPGSGERFEGLVPPVVAAPCFAIRRPAV
AVFSLDDYVAAGIMTAAQAAFLRRAVMERQNILVAGGTSTGKTTLVNALLAEIAQTGDRV
VLIEDTRELQCAAPNLVALCTRDGAASLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAW
GTGHPGGVGTLHAGSAIGTLRRLEQLIQEAVVTVPRALIAETIDVIAVLSGRGSARRLAE
LATVQGLSPDEDYILASAGDLS
NT seq 969 nt   +upstreamnt  +downstreamnt
gtgtccgttgctcctttccgctctgaagccgtcgcccgaggcacgcgcatgctgcgcacc
gccctcggcctggccatcgccgggcatctcgacgatccgtcaatcgtcgaagtgatgctc
aatcccgacggccggttgtggatcgaccggctggccggcgggatggaagacaccggcacc
cggatcacacccgccgacgccgagcggatcgtccgtcttgtcgcccatcatgtcggggtc
gaggtccatcccgccagcccccgcgtctccgccgaactgcccggaagtggggagcggttc
gaggggctggtgcccccggtggtagcggcgccctgctttgcgatccgacgccccgcggtc
gcggtgttctcgctcgacgattatgtggccgccggcatcatgaccgccgcacaggccgcg
tttctgcgtcgcgcggtgatggagcggcaaaacatcctcgtcgcaggcggcacctccacc
ggcaagaccaccctggtcaacgccctgctggctgagatcgcgcaaaccggtgatcgagtg
gtgctgatcgaggatacgcgcgaactgcaatgcgcggcgcccaatctggtcgctttgtgc
accagggacggcgccgcctcactctccgatctggtgcgctcctcgctgcggctgcgtccg
gaccggatcccgatcggcgaggtgcgcggcgccgaagcgctcgacctgctcaaggcctgg
ggcaccggccatcccggcggtgtcggcaccctgcacgccgggtctgcgatcggcactctg
cgccggttggagcagttgatccaggaagccgtcgtcaccgtcccgcgcgccctgatcgcc
gagaccatcgacgtgatcgcggtcctgtccgggcgcggcagcgcgcgtaggttggccgaa
ctcgccaccgtccagggcctgtccccggacgaggactacatcctcgcatctgccggagat
ttgtcatga

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