Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_1216
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Entry
Gdia_1216 CDS
T00798
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
gdj
Gluconacetobacter diazotrophicus PA1 5 (JGI)
Pathway
gdj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gdj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Gdia_1216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gdj03400
]
Gdia_1216
Enzymes [BR:
gdj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Gdia_1216
DNA repair and recombination proteins [BR:
gdj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Gdia_1216
RecFOR pathway proteins
Gdia_1216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
Mg_chelatase
AAA_22
AAA_3
nSTAND3
TsaE
DUF815
NB-ARC
AAA_14
AAA_18
Rad17
AAA_33
AAA_2
NACHT
NTPase_1
AAA_17
RNA_helicase
Bac_DnaA
AAA_24
NPHP3_N
AAA_28
Parvo_NS1
ABC_tran
Cytidylate_kin
IstB_IS21
bpMoxR
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ACI50999
LinkDB
All DBs
Position
complement(1353827..1354873)
Genome browser
AA seq
348 aa
AA seq
DB search
MTEIPLREVDPARNAEDAAEAGLRPQTLDDFTGQKASRENLAIFIAAARQRGEAMDHVLL
HGPPGLGKTTLAQIVARELGVGFRATSGPVIQRAGDLAAILTNLQPRDVLFIDEIHRLQP
AIEEVLYPAMEDFQLDLIIGEGPAARSVRIDLSPFTLVAATTRAGLLATPLRDRFGIPLR
LVFYTPDELRQIVSRGARKLEFDLTPEGAEEIARRSRGTPRIAGRLLRRVRDFASVTRGG
PVDRAMADAALSRLEVDSLGLDGMDRRYLRRIAEHHHGGPVGVETLAAALAEARDTLEDV
VEPYLIQEGLVLRTSRGRMLGERGWRHLGLAPPPRQTGQGDLLQGDDG
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaatccccctccgcgaggtcgatcccgcccgcaatgcggaagatgctgccgaa
gccgggctgcggccgcagaccctggacgatttcacgggccagaaggccagccgcgagaac
ctggccatcttcatcgccgccgcccgccagcggggcgaggcgatggaccacgtgctgctg
cacggcccgccggggctgggcaagaccacgctggcgcagatcgtggcgcgggaactgggg
gtcggctttcgcgcgacctcgggccccgtgatccagcgcgcgggcgacctggcggccatc
ctgaccaacctgcagccccgtgacgtgctgttcatcgacgaaatccaccgcctgcagccg
gcgatcgaggaagtactgtatccggcgatggaggatttccagctcgacctgatcatcggc
gaggggccggcggcgcgctcggtacgcatcgacctctcgcccttcaccctggtggccgcg
accacgcgggccgggctgctggccaccccgctgcgcgaccggttcggcattccgctgcgg
ctggtgttctacacccccgacgaactgcgccagatcgtctcgcgcggggcgcggaagctg
gaattcgacctgacgccggaaggggccgaggaaatcgcccgccggtcgcgcggcacgccg
cgcatcgccgggcgcctgctgcggcgggtgcgcgacttcgcctcggtcacccgtggcggc
ccggtggaccgcgcgatggccgacgccgccctgtcgcggctggaagtcgattcgctgggg
ctggacgggatggaccggcgctatctgcgccgcatcgccgaacatcatcacggcggcccg
gtgggggtggaaaccctggccgccgccctggccgaggcgcgagacacgctggaagacgtg
gtcgaaccctacctgatccaggaggggctggtcctgcgtaccagccggggacgcatgctg
ggcgagcggggctggcggcatctggggcttgcccccccgccacggcagacgggccagggc
gacctgctgcagggggacgacgggtga
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