Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_1218
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Entry
Gdia_1218 CDS
T00798
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
gdj
Gluconacetobacter diazotrophicus PA1 5 (JGI)
Pathway
gdj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gdj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Gdia_1218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gdj03400
]
Gdia_1218
Enzymes [BR:
gdj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Gdia_1218
DNA repair and recombination proteins [BR:
gdj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Gdia_1218
RecFOR pathway proteins
Gdia_1218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF977
Motif
Other DBs
NCBI-ProteinID:
ACI51001
UniProt:
A9HAV5
LinkDB
All DBs
Position
complement(1355469..1355975)
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AA seq
168 aa
AA seq
DB search
MVRLLGIDPGLRFTGWGLVDVDGNRLCHVADGVIATDGDAPVPERLRCLHDSLLDLVRRY
GPREAAVEETYVNRNGASTLKLGYARGVALLVPALAGIAVSEYGAMAVKRAVVGTGAASK
DQVEMMVRRLLPGATIRRADASDALAVAICHAHHRASALRVSAGTRMA
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggtccggctgctgggcatcgatccgggcctgcgcttcaccggctgggggctggtcgat
gtggacggcaaccggctgtgccatgtcgcggacggcgtgatcgccacggacggtgacgcg
cccgtgccggagcggctgcgctgcctgcacgattccctgctggacctcgtgcgccggtac
ggcccgcgcgaggccgcggtggaggagacgtacgtcaaccgcaacggggcctcgacgctg
aagctcggctatgcgcgcggggtggcgctgctggtgccggcgctggccggaatcgcggtt
tcggaatacggtgccatggcggtgaagcgggcggtggtcggcaccggcgccgccagcaag
gatcaggtggaaatgatggtgcgccgtctgctgcccggggcgacgatccgccgggcggac
gcgtccgatgcgctggcggtggcgatctgccatgcccatcaccgggccagcgccctgcgg
gtgtcggccgggacccgtatggcatga
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